RNA–Protein interactions for RNA: ENST00000489611.5

COL9A1-208, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,940 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-208ENST00000489611 LAMA5O15230 3695 aa12.67□□□□□ -0.38
COL9A1-208ENST00000489611 CD5P06127 495 aa12.67□□□□□ -0.38
COL9A1-208ENST00000489611 ACSF3Q4G176 576 aaPredicted RBP12.67□□□□□ -0.38
COL9A1-208ENST00000489611 Q6ZRG5 221 aa12.67□□□□□ -0.38
COL9A1-208ENST00000489611 BOLLQ8N9W6 283 aaKnown RBP12.67□□□□□ -0.38
COL9A1-208ENST00000489611 ZBTB34Q8NCN2 500 aa12.67□□□□□ -0.38
COL9A1-208ENST00000489611 LFNGQ8NES3 379 aa12.67□□□□□ -0.38
COL9A1-208ENST00000489611 SMIM3Q9BZL3 60 aa12.67□□□□□ -0.38
COL9A1-208ENST00000489611 TLNRD1Q9H1K6 362 aa12.67□□□□□ -0.38
COL9A1-208ENST00000489611 LIN7CQ9NUP9 197 aaKnown RBP12.67□□□□□ -0.38
COL9A1-208ENST00000489611 KCNIP1Q9NZI2 227 aa12.67□□□□□ -0.38
COL9A1-208ENST00000489611 ESPL1Q14674 2120 aa12.67□□□□□ -0.38
COL9A1-208ENST00000489611 C1QTNF9BB2RNN3 333 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 RNASEK-C17orf49H0YIS7 233 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 DNASE2O00115 360 aaPredicted RBP12.66□□□□□ -0.38
COL9A1-208ENST00000489611 WRBO00258 174 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 ZNHIT1O43257 154 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 ADAM20O43506 726 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 TSPAN15O95858 294 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 MSMO1Q15800 293 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 MYPOPQ86VE0 399 aaPredicted RBP12.66□□□□□ -0.38
COL9A1-208ENST00000489611 SPACA3Q8IXA5 215 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 PRR7Q8TB68 274 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 SMDT1Q9H4I9 107 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 PURGQ9UJV8 347 aaKnown RBP12.66□□□□□ -0.38
COL9A1-208ENST00000489611 ZDHHC8Q9ULC8 765 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 CDIPTO14735 213 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 IGLV1-44P01699 117 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 ATF4P18848 351 aaPredicted RBP12.66□□□□□ -0.38
COL9A1-208ENST00000489611 ZNF718Q3SXZ3 478 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 ATRAIDQ6UW56 229 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 BEND4Q6ZU67 534 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 WDR31Q8NA23 367 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 C9orf106Q8NAJ2 232 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 GNPNAT1Q96EK6 184 aaPredicted RBP12.66□□□□□ -0.38
COL9A1-208ENST00000489611 RAB40CQ96S21 281 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 PROCRQ9UNN8 238 aa12.66□□□□□ -0.38
COL9A1-208ENST00000489611 A0A1B0GWJ7 208 aa12.65□□□□□ -0.38
COL9A1-208ENST00000489611 TMEM30CPA0ZSE6 113 aa12.65□□□□□ -0.38
COL9A1-208ENST00000489611 IFNL4K9M1U5 179 aa12.65□□□□□ -0.38
COL9A1-208ENST00000489611 HEXAP06865 529 aa12.65□□□□□ -0.38
COL9A1-208ENST00000489611 NHLH2Q02577 135 aa12.65□□□□□ -0.38
COL9A1-208ENST00000489611 PEA15Q15121 130 aa12.65□□□□□ -0.38
COL9A1-208ENST00000489611 MBNL2Q5VZF2 373 aaKnown RBP12.65□□□□□ -0.38
COL9A1-208ENST00000489611 SLC35E4Q6ICL7 350 aa12.65□□□□□ -0.38
COL9A1-208ENST00000489611 TMEM252Q8N6L7 170 aa12.65□□□□□ -0.38
COL9A1-208ENST00000489611 CLRN3Q8NCR9 226 aa12.65□□□□□ -0.38
COL9A1-208ENST00000489611 IL1F10Q8WWZ1 152 aa12.65□□□□□ -0.38
COL9A1-208ENST00000489611 DOCK7Q96N67 2140 aa12.65□□□□□ -0.38
COL9A1-208ENST00000489611 MBD3L4A6NDZ8 208 aaPredicted RBP12.64□□□□□ -0.39
COL9A1-208ENST00000489611 MBD3L3A6NE82 208 aaPredicted RBP12.64□□□□□ -0.39
COL9A1-208ENST00000489611 MBD3L5A6NJ08 208 aaPredicted RBP12.64□□□□□ -0.39
COL9A1-208ENST00000489611 SIRPB1O00241 398 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 WDR1O75083 606 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 HAND1O96004 215 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 MUC1P15941 1255 aaPredicted RBP12.64□□□□□ -0.39
COL9A1-208ENST00000489611 ADCYAP1P18509 176 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 GCH1P30793 250 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 CAMLGP49069 296 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 PUSL1Q8N0Z8 303 aaKnown RBP12.64□□□□□ -0.39
COL9A1-208ENST00000489611 KDF1Q8NAX2 398 aaPredicted RBP12.64□□□□□ -0.39
COL9A1-208ENST00000489611 MBD3L2Q8NHZ7 208 aaPredicted RBP12.64□□□□□ -0.39
COL9A1-208ENST00000489611 FAM216AQ8WUB2 273 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 FAM122AQ96E09 287 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 PBDC1Q9BVG4 233 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 TOLLIPQ9H0E2 274 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 CACFD1Q9UGQ2 172 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 SSUH2Q9Y2M2 353 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 KPTNQ9Y664 436 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 FRYQ5TBA9 3013 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 BTBD17A6NE02 478 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 SSSCA1O60232 199 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 DFFBO76075 338 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 AKR1C2P52895 323 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 POLR2GP62487 172 aaKnown RBP eCLIP12.64□□□□□ -0.39
COL9A1-208ENST00000489611 RPL23AP62750 156 aaKnown RBP12.64□□□□□ -0.39
COL9A1-208ENST00000489611 PAX5Q02548 391 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 AKR1C1Q04828 323 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 TESK1Q15569 626 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 C3orf36Q3SXR2 165 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 VWA1Q6PCB0 445 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 TRAT1Q6PIZ9 186 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 TCTEX1D1Q8N7M0 179 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 PLPPR1Q8TBJ4 325 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 GALMQ96C23 342 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 SEBOXQ9HB31 216 aaPredicted RBP12.64□□□□□ -0.39
COL9A1-208ENST00000489611 WFDC1Q9HC57 220 aa12.64□□□□□ -0.39
COL9A1-208ENST00000489611 ZNF71Q9NQZ8 489 aaPredicted RBP12.64□□□□□ -0.39
COL9A1-208ENST00000489611 A0A1B0GW64 132 aa12.63□□□□□ -0.39
COL9A1-208ENST00000489611 A0A1W2PR80 420 aa12.63□□□□□ -0.39
COL9A1-208ENST00000489611 OOEPA6NGQ2 149 aa12.63□□□□□ -0.39
COL9A1-208ENST00000489611 OR5H1A6NKK0 313 aa12.63□□□□□ -0.39
COL9A1-208ENST00000489611 PRH1P02810 166 aa12.63□□□□□ -0.39
COL9A1-208ENST00000489611 GRPP07492 148 aa12.63□□□□□ -0.39
COL9A1-208ENST00000489611 SNCAP37840 140 aa12.63□□□□□ -0.39
COL9A1-208ENST00000489611 ERVS71-1P61550 626 aa12.63□□□□□ -0.39
COL9A1-208ENST00000489611 DHRS7BQ6IAN0 325 aaPredicted RBP12.63□□□□□ -0.39
COL9A1-208ENST00000489611 STX12Q86Y82 276 aa12.63□□□□□ -0.39
COL9A1-208ENST00000489611 C19orf12Q9NSK7 152 aa12.63□□□□□ -0.39
COL9A1-208ENST00000489611 RBM7Q9Y580 266 aaKnown RBP12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms