RNA–Protein interactions for RNA: ENST00000489562.5

C9orf3-221, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 2

Gene C9orf3, Length 646 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-221ENST00000489562 METTL11BQ5VVY1 283 aa11.42□□□□□ -0.58
C9orf3-221ENST00000489562 STEAP3Q658P3 488 aa11.42□□□□□ -0.58
C9orf3-221ENST00000489562 OR52W1Q6IF63 320 aa11.42□□□□□ -0.58
C9orf3-221ENST00000489562 CIARTQ8N365 385 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-221ENST00000489562 OR52M1Q8NGK5 317 aa11.42□□□□□ -0.58
C9orf3-221ENST00000489562 GALMQ96C23 342 aa11.42□□□□□ -0.58
C9orf3-221ENST00000489562 C18orf12Q96KH6 178 aa11.42□□□□□ -0.58
C9orf3-221ENST00000489562 THAP7Q9BT49 309 aaPredicted RBP11.42□□□□□ -0.58
C9orf3-221ENST00000489562 METTL8Q9H825 291 aaKnown RBP11.42□□□□□ -0.58
C9orf3-221ENST00000489562 MMP26Q9NRE1 261 aa11.42□□□□□ -0.58
C9orf3-221ENST00000489562 HIF1ANQ9NWT6 349 aa11.42□□□□□ -0.58
C9orf3-221ENST00000489562 ONECUT1Q9UBC0 465 aa11.42□□□□□ -0.58
C9orf3-221ENST00000489562 ANXA10Q9UJ72 324 aa11.42□□□□□ -0.58
C9orf3-221ENST00000489562 F2RL2O00254 374 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 HBZP02008 142 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 FOSL1P15407 271 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 TBPP20226 339 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 FPR2P25090 351 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 GDNFP39905 211 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 AP3S2P59780 193 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 ARPC4P59998 168 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 ERVFRD-1P60508 538 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 HTD2P86397 168 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 PAX8Q06710 450 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 CHRFAM7AQ494W8 412 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 RNASE12Q5GAN4 147 aaKnown RBP11.41□□□□□ -0.58
C9orf3-221ENST00000489562 GVQW1Q8N7I0 195 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 DEDD2Q8WXF8 326 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 MAFIPQ8WZ33 124 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 CABLES2Q9BTV7 478 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 UNKLQ9H9P5 680 aaKnown RBP11.41□□□□□ -0.58
C9orf3-221ENST00000489562 IDI2-AS1Q9NZ38 188 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 KLK11Q9UBX7 282 aa11.41□□□□□ -0.58
C9orf3-221ENST00000489562 MEX3AA1L020 520 aaKnown RBP11.4□□□□□ -0.58
C9orf3-221ENST00000489562 SCTP09683 121 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 IGHV1-8P0DP01 117 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 ZNF16P17020 682 aaPredicted RBP11.4□□□□□ -0.58
C9orf3-221ENST00000489562 PRTN3P24158 256 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 TAS2R19P59542 299 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 ARF6P62330 175 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 Q3ZCU0 254 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 TRIQKQ629K1 86 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 PRR18Q8N4B5 295 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 C11orf42Q8N5U0 333 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 TMEM229BQ8NBD8 167 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 OR5AP2Q8NGF4 316 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 OR1L1Q8NH94 360 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 SNAPC3Q92966 411 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 TRIM63Q969Q1 353 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 KIRREL1Q96J84 757 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 SDHCQ99643 169 aaPredicted RBP11.4□□□□□ -0.58
C9orf3-221ENST00000489562 SIRPDQ9H106 197 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 NECAP2Q9NVZ3 263 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 JPT1Q9UK76 154 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 SESN1Q9Y6P5 492 aa11.4□□□□□ -0.58
C9orf3-221ENST00000489562 IGKV1D-8A0A087WSZ0 117 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 ZNF736B4DX44 427 aaPredicted RBP11.39□□□□□ -0.59
C9orf3-221ENST00000489562 RGS11O94810 467 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 TOX4O94842 621 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 GSTT2P0CG29 244 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 ZBTB25P24278 435 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 OR3A3P47888 321 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 INPP1P49441 399 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 CDK10Q15131 360 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 LY6G6FQ5SQ64 297 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 PRAMEF5Q5TYX0 476 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 NCR3LG1Q68D85 454 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 Q8N7P7 452 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 OR5H2Q8NGV7 314 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 RFESDQ8TAC1 157 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 IL1F10Q8WWZ1 152 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 HEXA-AS1Q9H8Q6 139 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 OR2S2Q9NQN1 319 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 AUP1Q9Y679 476 aa11.39□□□□□ -0.59
C9orf3-221ENST00000489562 A0A087X0M5 115 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 TRBV6-7A0A0A0MS04 114 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 A0A1B0GX30 115 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 ANKRD20A5PA0PJZ0 165 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 SDCBPO00560 298 aaPredicted RBP11.38□□□□□ -0.59
C9orf3-221ENST00000489562 HSPA12AO43301 675 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 CD5LO43866 347 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 CD74P04233 296 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 IL7P13232 177 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 CD99P14209 185 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 MMP9P14780 707 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 OMGP23515 440 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 HLA-DMAP28067 261 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 CD34P28906 385 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 FAUP35544 74 aaKnown RBP11.38□□□□□ -0.59
C9orf3-221ENST00000489562 LOXL3P58215 753 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 MEF2DQ14814 521 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 RNASE10Q5GAN6 216 aaKnown RBP11.38□□□□□ -0.59
C9orf3-221ENST00000489562 VMO1Q7Z5L0 202 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 LYSMD2Q8IV50 215 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 TOMM5Q8N4H5 51 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 TEX29Q8N6K0 151 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 OR10J5Q8NHC4 309 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 FAM216AQ8WUB2 273 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 GINS4Q9BRT9 223 aa11.38□□□□□ -0.59
C9orf3-221ENST00000489562 TMUB1Q9BVT8 246 aa11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms