RNA–Protein interactions for RNA: ENST00000489378.5

SSBP1-212, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 1,434 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-212ENST00000489378 VHLP40337 213 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 RIDAP52758 137 aaKnown RBP6.9□□□□□ -1.31
SSBP1-212ENST00000489378 KLF5Q13887 457 aaPredicted RBP6.9□□□□□ -1.31
SSBP1-212ENST00000489378 LRRC36Q1X8D7 754 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 ODF4Q2M2E3 257 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 C8orf82Q6P1X6 216 aaPredicted RBP6.9□□□□□ -1.31
SSBP1-212ENST00000489378 SLC16A12Q6ZSM3 486 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 HDXQ7Z353 690 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 LYG2Q86SG7 212 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 ZNF565Q8N9K5 539 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 PHLDA1Q8WV24 401 aaPredicted RBP6.9□□□□□ -1.31
SSBP1-212ENST00000489378 MS4A10Q96PG2 267 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 ANKRD60Q9BZ19 345 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 CHST5Q9GZS9 411 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 IL1RAPQ9NPH3 570 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 ADAM30Q9UKF2 790 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 OR52A1Q9UKL2 312 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 IKZF2Q9UKS7 526 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 A3GALT2U3KPV4 340 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 UBR4Q5T4S7 5183 aa6.9□□□□□ -1.31
SSBP1-212ENST00000489378 DEGS1O15121 323 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 CYB5AP00167 134 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 CSTBP04080 98 aaKnown RBP6.89□□□□□ -1.31
SSBP1-212ENST00000489378 FABP3P05413 133 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 MRPL3P09001 348 aaKnown RBP6.89□□□□□ -1.31
SSBP1-212ENST00000489378 FASP25445 335 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 MECP2P51608 486 aaKnown RBP6.89□□□□□ -1.31
SSBP1-212ENST00000489378 HMGA2P52926 109 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 SYNJ2BPP57105 145 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 TPPP2P59282 170 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 TNFRSF9Q07011 255 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 PPP1R8Q12972 351 aaKnown RBP6.89□□□□□ -1.31
SSBP1-212ENST00000489378 CDK5R1Q15078 307 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 LINC00311Q8N616 119 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 CHST4Q8NCG5 386 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 OR51T1Q8NGJ9 327 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 RFT1Q96AA3 541 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 APOL4Q9BPW4 351 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 KRTAP9-3Q9BYQ3 159 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 YIPF3Q9GZM5 350 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 R4GMQ9 66 aa6.89□□□□□ -1.31
SSBP1-212ENST00000489378 DMBT1Q9UGM3 2413 aaPredicted RBP6.89□□□□□ -1.31
SSBP1-212ENST00000489378 IGKV1-9A0A0C4DH69 117 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 ANKRD34BA5PLL1 514 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 ZNF785A8K8V0 405 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 OR11H12B2RN74 326 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 BOLA2-SMG1P6H3BVE0 249 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 TNFRSF11BO00300 401 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 SLC31A2O15432 143 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 PRODHO43272 600 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 E2F6O75461 281 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 GATBO75879 557 aaKnown RBP6.88□□□□□ -1.31
SSBP1-212ENST00000489378 CCNB2O95067 398 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 EGR2P11161 476 aaPredicted RBP6.88□□□□□ -1.31
SSBP1-212ENST00000489378 ZP3P21754 424 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 SLC2A5P22732 501 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 RBP2P50120 134 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 ATP1B3P54709 279 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 MTCP1P56278 107 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 RPS7P62081 194 aaKnown RBP6.88□□□□□ -1.31
SSBP1-212ENST00000489378 PDZK1IP1Q13113 114 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 TMEM179BQ7Z7N9 219 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 CPOQ8IVL8 374 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 OR10A7Q8NGE5 316 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 UBALD1Q8TB05 177 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 PLPPR1Q8TBJ4 325 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 DYDC1Q8WWB3 177 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 MCUR1Q96AQ8 359 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 MOB1AQ9H8S9 216 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 SLC2A8Q9NY64 477 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 AASSQ9UDR5 926 aa6.88□□□□□ -1.31
SSBP1-212ENST00000489378 IGHV3-43A0A0B4J1X8 118 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 MSGN1A6NI15 193 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 NPIPB6E9PJ23 425 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 EDF1O60869 148 aaKnown RBP6.87□□□□□ -1.31
SSBP1-212ENST00000489378 KRT36O76013 467 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 KDM4BO94953 1096 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 IGHV3-43DP0DP04 118 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 IL3RAP26951 378 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 CRIP2P52943 208 aaPredicted RBP6.87□□□□□ -1.31
SSBP1-212ENST00000489378 ACTBP60709 375 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 LSAMPQ13449 338 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 DYRK1AQ13627 763 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 C5orf64Q2M2E5 130 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 CD300EQ496F6 205 aaPredicted RBP6.87□□□□□ -1.31
SSBP1-212ENST00000489378 PAN3Q58A45 887 aaKnown RBP6.87□□□□□ -1.31
SSBP1-212ENST00000489378 RSBN1Q5VWQ0 802 aaPredicted RBP6.87□□□□□ -1.31
SSBP1-212ENST00000489378 LIN54Q6MZP7 749 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 ZNF575Q86XF7 245 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 RDH10Q8IZV5 341 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 DNAAF1Q8NEP3 725 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 TEX47Q8TBZ9 253 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 Q96M66 194 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 HOPXQ9BPY8 73 aaPredicted RBP6.87□□□□□ -1.31
SSBP1-212ENST00000489378 SIKE1Q9BRV8 207 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 NCOR1P1Q9H4R4 102 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 RANGRFQ9HD47 186 aaPredicted RBP6.87□□□□□ -1.31
SSBP1-212ENST00000489378 SLC23A1Q9UHI7 598 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 NUBP2Q9Y5Y2 271 aa6.87□□□□□ -1.31
SSBP1-212ENST00000489378 TRAV24A0A0B4J272 114 aa6.86□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms