RNA–Protein interactions for RNA: ENST00000489108.1

USP48-210, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 443 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-210ENST00000489108 TXNL1O43396 289 aa12.39□□□□□ -0.43
USP48-210ENST00000489108 MITFO75030 526 aaPredicted RBP12.39□□□□□ -0.43
USP48-210ENST00000489108 FAM107AO95990 144 aa12.39□□□□□ -0.43
USP48-210ENST00000489108 IGHV3-11P01762 117 aa12.39□□□□□ -0.43
USP48-210ENST00000489108 HLA-DRB1P01911 266 aa12.39□□□□□ -0.43
USP48-210ENST00000489108 ATP6V1E1P36543 226 aa12.39□□□□□ -0.43
USP48-210ENST00000489108 ZNF691Q5VV52 312 aa12.39□□□□□ -0.43
USP48-210ENST00000489108 FAHD1Q6P587 224 aa12.39□□□□□ -0.43
USP48-210ENST00000489108 OR10K1Q8NGX5 313 aa12.39□□□□□ -0.43
USP48-210ENST00000489108 FLYWCH2Q96CP2 140 aaKnown RBP12.39□□□□□ -0.43
USP48-210ENST00000489108 CCDC124Q96CT7 223 aaKnown RBP12.39□□□□□ -0.43
USP48-210ENST00000489108 ASB9Q96DX5 294 aa12.39□□□□□ -0.43
USP48-210ENST00000489108 FAM110AQ9BQ89 295 aa12.39□□□□□ -0.43
USP48-210ENST00000489108 TMED9Q9BVK6 235 aa12.39□□□□□ -0.43
USP48-210ENST00000489108 A0A1W2PN81 502 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 ZAR1LA6NP61 321 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 CHRNA7P36544 502 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 ZNF137PP52743 207 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 ACTBP60709 375 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 LSAMPQ13449 338 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 ECSCRQ19T08 205 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 CT45A1Q5HYN5 189 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 ZNF439Q8NDP4 499 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 PXT1Q8NFP0 134 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 CT45A3Q8NHU0 189 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 LINC00476Q8WZB0 136 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 FBXO7Q9Y3I1 522 aa12.38□□□□□ -0.43
USP48-210ENST00000489108 TMEM30CPA0ZSE6 113 aa12.37□□□□□ -0.43
USP48-210ENST00000489108 SLC25A17O43808 307 aa12.37□□□□□ -0.43
USP48-210ENST00000489108 C19orf54Q5BKX5 351 aa12.37□□□□□ -0.43
USP48-210ENST00000489108 LPCAT4Q643R3 524 aa12.37□□□□□ -0.43
USP48-210ENST00000489108 LIN54Q6MZP7 749 aa12.37□□□□□ -0.43
USP48-210ENST00000489108 FDX2Q6P4F2 183 aa12.37□□□□□ -0.43
USP48-210ENST00000489108 NRBF2Q96F24 287 aa12.37□□□□□ -0.43
USP48-210ENST00000489108 HIPK2Q9H2X6 1198 aa12.37□□□□□ -0.43
USP48-210ENST00000489108 AQP12BA6NM10 295 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 ORC5O43913 435 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 HTR3BO95264 441 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 LY6G6CO95867 125 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 NDPQ00604 133 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 C5orf64Q2M2E5 130 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 Q3ZCU0 254 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 SATL1Q86VE3 508 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 AQP12AQ8IXF9 295 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 OR10V1Q8NGI7 309 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 ZNF251Q9BRH9 671 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 ZNF446Q9NWS9 450 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 FOXA2Q9Y261 457 aaPredicted RBP12.36□□□□□ -0.43
USP48-210ENST00000489108 ERGIC3Q9Y282 383 aa12.36□□□□□ -0.43
USP48-210ENST00000489108 PCLOQ9Y6V0 5065 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 OR4C45A6NMZ5 311 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 GABRPO00591 440 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 NBR2O15453 112 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 SULT1B1O43704 296 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 LANCL1O43813 399 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 FKBP6O75344 327 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 OR7C1O76099 320 aaPredicted RBP12.35□□□□□ -0.43
USP48-210ENST00000489108 MT-ND4P03905 459 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 HTR1AP08908 422 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 CCR9P51686 369 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 RSU1Q15404 277 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 SERPINA12Q8IW75 414 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 OR5D14Q8NGL3 314 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 TNFAIP8L1Q8WVP5 186 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 NSL1Q96IY1 281 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 RHOVQ96L33 236 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 MS4A10Q96PG2 267 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 GNG12Q9UBI6 72 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 ST3GAL6Q9Y274 331 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 A3GALT2U3KPV4 340 aa12.35□□□□□ -0.43
USP48-210ENST00000489108 ARPC1BO15143 372 aaKnown RBP12.34□□□□□ -0.43
USP48-210ENST00000489108 EGR2P11161 476 aaPredicted RBP12.34□□□□□ -0.43
USP48-210ENST00000489108 RAB40BQ12829 278 aa12.34□□□□□ -0.43
USP48-210ENST00000489108 LRRC36Q1X8D7 754 aa12.34□□□□□ -0.43
USP48-210ENST00000489108 KCTD20Q7Z5Y7 419 aa12.34□□□□□ -0.43
USP48-210ENST00000489108 DDB2Q92466 427 aa12.34□□□□□ -0.43
USP48-210ENST00000489108 GPER1Q99527 375 aa12.34□□□□□ -0.43
USP48-210ENST00000489108 NABP2Q9BQ15 211 aa12.34□□□□□ -0.43
USP48-210ENST00000489108 THAP7Q9BT49 309 aaPredicted RBP12.34□□□□□ -0.43
USP48-210ENST00000489108 CST11Q9H112 138 aa12.34□□□□□ -0.43
USP48-210ENST00000489108 IFT22Q9H7X7 185 aa12.34□□□□□ -0.43
USP48-210ENST00000489108 ARL2BPQ9Y2Y0 163 aa12.34□□□□□ -0.43
USP48-210ENST00000489108 NUBP2Q9Y5Y2 271 aa12.34□□□□□ -0.43
USP48-210ENST00000489108 H0Y980 276 aa12.33□□□□□ -0.44
USP48-210ENST00000489108 DCTN3O75935 186 aa12.33□□□□□ -0.44
USP48-210ENST00000489108 RGS11O94810 467 aa12.33□□□□□ -0.44
USP48-210ENST00000489108 CSTBP04080 98 aaKnown RBP12.33□□□□□ -0.44
USP48-210ENST00000489108 HOXB6P17509 224 aaKnown RBP12.33□□□□□ -0.44
USP48-210ENST00000489108 CRIP2P52943 208 aaPredicted RBP12.33□□□□□ -0.44
USP48-210ENST00000489108 ALKBH1Q13686 389 aaKnown RBP12.33□□□□□ -0.44
USP48-210ENST00000489108 HSP90B2PQ58FF3 399 aa12.33□□□□□ -0.44
USP48-210ENST00000489108 ATAD3CQ5T2N8 411 aa12.33□□□□□ -0.44
USP48-210ENST00000489108 RNLSQ5VYX0 342 aa12.33□□□□□ -0.44
USP48-210ENST00000489108 ZNF660Q6AZW8 331 aaPredicted RBP12.33□□□□□ -0.44
USP48-210ENST00000489108 ASCL4Q6XD76 172 aa12.33□□□□□ -0.44
USP48-210ENST00000489108 LINC00322Q6ZN03 302 aaPredicted RBP12.33□□□□□ -0.44
USP48-210ENST00000489108 GTSCR1Q86UQ5 136 aa12.33□□□□□ -0.44
USP48-210ENST00000489108 PARP16Q8N5Y8 322 aa12.33□□□□□ -0.44
USP48-210ENST00000489108 NPBQ8NG41 125 aa12.33□□□□□ -0.44
USP48-210ENST00000489108 FAM192AQ9GZU8 254 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 29.7 ms