RNA–Protein interactions for RNA: ENST00000488765.1

MCF2L-229, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 2

Gene MCF2L, Length 3,205 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-229ENST00000488765 BAGE2Q86Y30 109 aa13.96□□□□□ -0.17
MCF2L-229ENST00000488765 SNIP1Q8TAD8 396 aaKnown RBP13.96□□□□□ -0.17
MCF2L-229ENST00000488765 GNPNAT1Q96EK6 184 aaPredicted RBP13.96□□□□□ -0.17
MCF2L-229ENST00000488765 ANGPTL4Q9BY76 406 aa13.96□□□□□ -0.17
MCF2L-229ENST00000488765 LNP1A1A4G5 178 aa13.96□□□□□ -0.17
MCF2L-229ENST00000488765 IFNA5P01569 189 aa13.96□□□□□ -0.17
MCF2L-229ENST00000488765 AADACP22760 399 aa13.96□□□□□ -0.17
MCF2L-229ENST00000488765 SPATA45Q537H7 98 aa13.96□□□□□ -0.17
MCF2L-229ENST00000488765 CISD1Q9NZ45 108 aaKnown RBP13.96□□□□□ -0.17
MCF2L-229ENST00000488765 H3BMH7 237 aa13.96□□□□□ -0.18
MCF2L-229ENST00000488765 THBS3P49746 956 aa13.96□□□□□ -0.18
MCF2L-229ENST00000488765 BIDP55957 195 aa13.96□□□□□ -0.18
MCF2L-229ENST00000488765 NT5CQ8TCD5 201 aa13.96□□□□□ -0.18
MCF2L-229ENST00000488765 SCGB1C1Q8TD33 95 aa13.96□□□□□ -0.18
MCF2L-229ENST00000488765 RNF133Q8WVZ7 376 aa13.96□□□□□ -0.18
MCF2L-229ENST00000488765 LOXL4Q96JB6 756 aa13.96□□□□□ -0.18
MCF2L-229ENST00000488765 RYDENQ9NUL5 291 aaKnown RBP13.96□□□□□ -0.18
MCF2L-229ENST00000488765 CACNA1EQ15878 2313 aa13.96□□□□□ -0.18
MCF2L-229ENST00000488765 TMED7-TICAM2A0A0A6YYA0 188 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 PLPP3O14495 311 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 BLKP51451 505 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 HNRNPA3P51991 378 aaKnown RBP13.95□□□□□ -0.18
MCF2L-229ENST00000488765 FBXW4P57775 412 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 TAS2R30P59541 319 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 UBE2G2P60604 165 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 ACOT6Q3I5F7 207 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-229ENST00000488765 ARHGEF39Q8N4T4 335 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 OR2M3Q8NG83 312 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 OR6C1Q96RD1 312 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 ZDHHC11Q9H8X9 412 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 LYRM2Q9NU23 88 aaPredicted RBP13.95□□□□□ -0.18
MCF2L-229ENST00000488765 SLC17A4Q9Y2C5 497 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 FAM186AA6NE01 2351 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 SGCBQ16585 318 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 PIGYQ3MUY2 71 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 CTDSP1Q9GZU7 261 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 LYRM4Q9HD34 91 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 PRTFDC1Q9NRG1 225 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 LAMTOR2Q9Y2Q5 125 aa13.95□□□□□ -0.18
MCF2L-229ENST00000488765 C3orf85A0A1B0GTC6 90 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 ZNHIT1O43257 154 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 GYPAP02724 150 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 KLF3P57682 345 aaPredicted RBP13.94□□□□□ -0.18
MCF2L-229ENST00000488765 KIAA1644Q3SXP7 199 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 NUDT10Q8NFP7 164 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 MRPL30Q8TCC3 161 aaKnown RBP13.94□□□□□ -0.18
MCF2L-229ENST00000488765 PSMF1Q92530 271 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 DERL1Q9BUN8 251 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 SLC39A9Q9NUM3 307 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 ANAPC10Q9UM13 185 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 SEMA4FO95754 770 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 HERV-K104P61576 105 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 UBE2V1Q13404 147 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 ARL6IP1Q15041 203 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 ZNF468Q5VIY5 522 aaPredicted RBP13.94□□□□□ -0.18
MCF2L-229ENST00000488765 C16orf54Q6UWD8 224 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 C1QTNF9P0C862 333 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 GP1BBP13224 206 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 PMCHP20382 165 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 OR1D4P47884 311 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 PRR31Q5SQ13 230 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 ELSPBP1Q96BH3 223 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 TBL1XR1Q9BZK7 514 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 NECAP2Q9NVZ3 263 aa13.94□□□□□ -0.18
MCF2L-229ENST00000488765 ZNF732B4DXR9 585 aa13.93□□□□□ -0.18
MCF2L-229ENST00000488765 TGFBR3Q03167 851 aa13.93□□□□□ -0.18
MCF2L-229ENST00000488765 MMABQ96EY8 250 aaPredicted RBP13.93□□□□□ -0.18
MCF2L-229ENST00000488765 GABRG3Q99928 467 aa13.93□□□□□ -0.18
MCF2L-229ENST00000488765 SDK2Q58EX2 2172 aa13.93□□□□□ -0.18
MCF2L-229ENST00000488765 MYF5P13349 255 aa13.93□□□□□ -0.18
MCF2L-229ENST00000488765 TLE3Q04726 772 aa13.93□□□□□ -0.18
MCF2L-229ENST00000488765 ARL16Q0P5N6 197 aa13.93□□□□□ -0.18
MCF2L-229ENST00000488765 OR8G2PQ6IF36 304 aa13.93□□□□□ -0.18
MCF2L-229ENST00000488765 DIRC3C9JPN6 131 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 COL8A2P25067 703 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 SUMO1P63165 101 aaKnown RBP13.92□□□□□ -0.18
MCF2L-229ENST00000488765 TBC1D26Q86UD7 250 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 ZDHHC23Q8IYP9 409 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 H1FOOQ8IZA3 346 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-229ENST00000488765 SGMS2Q8NHU3 365 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 LIPHQ8WWY8 451 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 C20orf144Q9BQM9 153 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 TIMM29Q9BSF4 260 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 KIR3DX1Q9H7L2 352 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 PRRC2CQ9Y520 2896 aaKnown RBP13.92□□□□□ -0.18
MCF2L-229ENST00000488765 NPIPA2E9PIF3 369 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 SLC35B1P78383 322 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 ARF1P84077 181 aaKnown RBP13.92□□□□□ -0.18
MCF2L-229ENST00000488765 MEF2BQ02080 365 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-229ENST00000488765 OR5AU1Q8NGC0 362 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 ZNF596Q8TC21 504 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 ST6GALNAC6Q969X2 333 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 ZNF501Q96CX3 271 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-229ENST00000488765 STARD4Q96DR4 205 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 FBXL7Q9UJT9 491 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 TP53TG3Q9ULZ0 132 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 NCOA6Q14686 2063 aaPredicted RBP13.92□□□□□ -0.18
MCF2L-229ENST00000488765 GPR179Q6PRD1 2367 aa13.92□□□□□ -0.18
MCF2L-229ENST00000488765 HNRNPA2B1P22626 353 aaKnown RBP13.92□□□□□ -0.18
MCF2L-229ENST00000488765 FBLN7Q53RD9 439 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms