RNA–Protein interactions for RNA: ENST00000488228.1

UBE4B-210, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 560 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-210ENST00000488228 ORC5O43913 435 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 CD3GP09693 182 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 RORCP51449 518 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 MADCAM1Q13477 382 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 GNMTQ14749 295 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 HMGN3Q15651 99 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 TUSC1Q2TAM9 212 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 LDLRAD2Q5SZI1 272 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 ZNF626Q68DY1 528 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 ZNF880Q6PDB4 577 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 TRAT1Q6PIZ9 186 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 LHFPL4Q7Z7J7 247 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 OR11H6Q8NGC7 330 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 OR10V1Q8NGI7 309 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 NUDCD2Q8WVJ2 157 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 KCTD12Q96CX2 325 aaKnown RBP8.98□□□□□ -0.97
UBE4B-210ENST00000488228 AJUBAQ96IF1 538 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 DUX5Q96PT3 197 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 ESM1Q9NQ30 184 aa8.98□□□□□ -0.97
UBE4B-210ENST00000488228 TRAV18A0A075B6X5 111 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 A0A087X0M5 115 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 A0A1B0GX30 115 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 DNAJC9-AS1A6NH13 148 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 SERPINE3A8MV23 424 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 F2RL2O00254 374 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 SPINT2O43291 252 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 HPGDSO60760 199 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 TMEM127O75204 238 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 SCGNO76038 276 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 VENTXO95231 258 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 FCGR3AP08637 254 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 PTHLHP12272 177 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 GZMHP20718 246 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 CD34P28906 385 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 LOXL3P58215 753 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 BPIFB3P59826 476 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 HLA-DRB3P79483 266 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 MRPS15P82914 257 aaKnown RBP8.97□□□□□ -0.97
UBE4B-210ENST00000488228 ARFRP1Q13795 201 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 CDNFQ49AH0 187 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 MIDNQ504T8 468 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 PLA1AQ53H76 456 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 OR52W1Q6IF63 320 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 DYNAPQ8N1N2 210 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 ABHD12Q8N2K0 398 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 OR4P4Q8NGL7 312 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 DYNC2LI1Q8TCX1 351 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 ZNF418Q8TF45 676 aaPredicted RBP8.97□□□□□ -0.97
UBE4B-210ENST00000488228 IL1F10Q8WWZ1 152 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 GCDHQ92947 438 aaPredicted RBP8.97□□□□□ -0.97
UBE4B-210ENST00000488228 PHF21AQ96BD5 680 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 Q9N2K0 584 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.97□□□□□ -0.97
UBE4B-210ENST00000488228 GFOD1Q9NXC2 390 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 KCNIP1Q9NZI2 227 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 CCDC59Q9P031 241 aaKnown RBP8.97□□□□□ -0.97
UBE4B-210ENST00000488228 GNG12Q9UBI6 72 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 ZNF230Q9UIE0 474 aaPredicted RBP8.97□□□□□ -0.97
UBE4B-210ENST00000488228 FAM96BQ9Y3D0 163 aa8.97□□□□□ -0.97
UBE4B-210ENST00000488228 TRBV6-6A0A0A6YYG2 114 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 SLC31A2O15432 143 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 TCF21O43680 179 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 SSX5O60225 188 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 IFNA2P01563 188 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 IGLV1-47P01700 117 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 MELTFP08582 738 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 GSTP1P09211 210 aaKnown RBP8.96□□□□□ -0.98
UBE4B-210ENST00000488228 FBP1P09467 338 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 ZNF182P17025 639 aaPredicted RBP8.96□□□□□ -0.98
UBE4B-210ENST00000488228 PPP1CCP36873 323 aaKnown RBP8.96□□□□□ -0.98
UBE4B-210ENST00000488228 LGALS4P56470 323 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 GNG2P59768 71 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 HILS1P60008 231 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 ZNF260Q3ZCT1 412 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 RBMS3Q6XE24 437 aaKnown RBP8.96□□□□□ -0.98
UBE4B-210ENST00000488228 OR52L2PQ8NGH6 319 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 OR9G1Q8NH87 305 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 ACOT12Q8WYK0 555 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 AP3S1Q92572 193 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 ZDHHC16Q969W1 377 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 DCUN1D5Q9BTE7 237 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 ABCG5Q9H222 651 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 RIMS4Q9H426 269 aaPredicted RBP8.96□□□□□ -0.98
UBE4B-210ENST00000488228 TNFRSF19Q9NS68 423 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 RSL24D1Q9UHA3 163 aaKnown RBP8.96□□□□□ -0.98
UBE4B-210ENST00000488228 PSG11Q9UQ72 335 aa8.96□□□□□ -0.98
UBE4B-210ENST00000488228 COL6A5A8TX70 2615 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 IGKV1D-8A0A087WSZ0 117 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 A0A0A6YYH2 397 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 A6NJ64 397 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 TOR1AO14656 332 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 HOXA3O43365 443 aaPredicted RBP8.95□□□□□ -0.98
UBE4B-210ENST00000488228 IGHV4-59P01825 116 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 ELK1P19419 428 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 SOX6P35712 828 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 TALDO1P37837 337 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 TAS2R20P59543 309 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 BAMBIQ13145 260 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 HERPUD1Q15011 391 aa8.95□□□□□ -0.98
UBE4B-210ENST00000488228 HLA-DRB5Q30154 266 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms