RNA–Protein interactions for RNA: ENST00000488111.1

COPS7B-221, Transcript of COP9 signalosome subunit 7B, humanhuman

TSL 1 (best)

Gene COPS7B, Length 2,381 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7B-221ENST00000488111 KCNG3Q8TAE7 436 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 FAM213BQ8TBF2 198 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 ARHGAP5-AS1Q96IT6 56 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 NOL4LQ96MY1 436 aaPredicted RBP11.74□□□□□ -0.53
COPS7B-221ENST00000488111 PLEK2Q9NYT0 353 aa11.74□□□□□ -0.53
COPS7B-221ENST00000488111 MRPS28Q9Y2Q9 187 aaKnown RBP11.74□□□□□ -0.53
COPS7B-221ENST00000488111 SMG1Q96Q15 3661 aaKnown RBP11.73□□□□□ -0.53
COPS7B-221ENST00000488111 CYB5BO43169 146 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 LYZL6O75951 148 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 HLA-HP01893 362 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 CST2P09228 141 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 IGHV1-2P23083 117 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 TIMP3P35625 211 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 RBPJQ06330 500 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 HAGHQ16775 308 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 SLC22A25Q6T423 547 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 SGPP2Q8IWX5 399 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 FRZBQ92765 325 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 RCC1LQ96I51 464 aaKnown RBP11.73□□□□□ -0.53
COPS7B-221ENST00000488111 HIST1H2BLQ99880 126 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 NDUFAF3Q9BU61 184 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 SUCNR1Q9BXA5 334 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 TMEM59Q9BXS4 323 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.73□□□□□ -0.53
COPS7B-221ENST00000488111 PLSCR4Q9NRQ2 329 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 PROCRQ9UNN8 238 aa11.73□□□□□ -0.53
COPS7B-221ENST00000488111 SMCO3A2RU48 225 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 ZNF503-AS2A6NEH8 195 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 ZNF878C9JN71 531 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 SCGB1D2O95969 90 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 COX5BP10606 129 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 ECI1P42126 302 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 CASP6P55212 293 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 SNU13P55769 128 aaKnown RBP11.72□□□□□ -0.53
COPS7B-221ENST00000488111 ARFRP1Q13795 201 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 JOSD1Q15040 202 aaPredicted RBP11.72□□□□□ -0.53
COPS7B-221ENST00000488111 OR8G1Q15617 311 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 ZNF774Q6NX45 483 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 SPSB3Q6PJ21 355 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 TMEM182Q6ZP80 229 aaPredicted RBP11.72□□□□□ -0.53
COPS7B-221ENST00000488111 ABHD12BQ7Z5M8 362 aaPredicted RBP11.72□□□□□ -0.53
COPS7B-221ENST00000488111 KCNIP3Q9Y2W7 256 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 URGCP-MRPS24S4R325 110 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 TRGV8A0A0C4DH27 118 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 A0A1B0GV50 99 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 A0A1W2PR80 420 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 CRYM-AS1A6NIL9 109 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 H0YL77 283 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 DVL1O14640 695 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 PHOX2AO14813 284 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 TGOLN2O43493 480 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 CGAP01215 116 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 CTSDP07339 412 aaPredicted RBP11.72□□□□□ -0.53
COPS7B-221ENST00000488111 DBHP09172 617 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 FGF7P21781 194 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 CEACAM8P31997 349 aaPredicted RBP11.72□□□□□ -0.53
COPS7B-221ENST00000488111 CCL20P78556 96 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 PSG4Q00888 419 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 NHLH2Q02577 135 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 FAM189A2Q15884 450 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 OR5AS1Q8N127 324 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 OR1K1Q8NGR3 316 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 TVP23CQ96ET8 276 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 ST6GALNAC5Q9BVH7 336 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 BANF2Q9H503 90 aa11.72□□□□□ -0.53
COPS7B-221ENST00000488111 NCOA6Q14686 2063 aaPredicted RBP11.72□□□□□ -0.53
COPS7B-221ENST00000488111 F5H5K5 113 aa11.71□□□□□ -0.53
COPS7B-221ENST00000488111 ANOS1P23352 680 aa11.71□□□□□ -0.53
COPS7B-221ENST00000488111 HIST1H3AP68431 136 aa11.71□□□□□ -0.53
COPS7B-221ENST00000488111 SP5Q6BEB4 398 aaPredicted RBP11.71□□□□□ -0.53
COPS7B-221ENST00000488111 Q6ZT83 130 aa11.71□□□□□ -0.53
COPS7B-221ENST00000488111 DPPA2Q7Z7J5 298 aa11.71□□□□□ -0.53
COPS7B-221ENST00000488111 ZNF429Q86V71 674 aa11.71□□□□□ -0.53
COPS7B-221ENST00000488111 HSD17B11Q8NBQ5 300 aa11.71□□□□□ -0.53
COPS7B-221ENST00000488111 RNASEH2CQ8TDP1 164 aaKnown RBP11.71□□□□□ -0.53
COPS7B-221ENST00000488111 PBOV1Q9GZY1 135 aa11.71□□□□□ -0.53
COPS7B-221ENST00000488111 A0A0G2JNJ9 132 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 A0A1W2PP11 408 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 FOXI3A8MTJ6 420 aaPredicted RBP11.71□□□□□ -0.54
COPS7B-221ENST00000488111 SNRPCP09234 159 aaKnown RBP11.71□□□□□ -0.54
COPS7B-221ENST00000488111 MMP7P09237 267 aaPredicted RBP11.71□□□□□ -0.54
COPS7B-221ENST00000488111 BMP5P22003 454 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 OR3A4PP47883 348 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 RND3P61587 244 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 AKR1C8PQ5T2L2 129 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 FAM89BQ8N5H3 189 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 SPACA5Q96QH8 159 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 OR2H1Q9GZK4 316 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 KIAA1456Q9P272 454 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 Q9UFV3 132 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 ARHGAP21Q5T5U3 1957 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 RELNP78509 3460 aa11.71□□□□□ -0.54
COPS7B-221ENST00000488111 OR5H8P0DN80 308 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 CTSSP25774 331 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 USF2Q15853 346 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-221ENST00000488111 RSPO1Q2MKA7 263 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-221ENST00000488111 SLC35E3Q7Z769 313 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 ZNF283Q8N7M2 679 aa11.7□□□□□ -0.54
COPS7B-221ENST00000488111 BCL2L2Q92843 193 aaPredicted RBP11.7□□□□□ -0.54
COPS7B-221ENST00000488111 FAM210BQ96KR6 192 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms