RNA–Protein interactions for RNA: ENST00000487698.5

SF3B1-211, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 1 (best) BASIC

Gene SF3B1, Length 2,127 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-211ENST00000487698 ZNF788Q6ZQV5 615 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 TPRX1Q8N7U7 411 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 ZNRF1Q8ND25 227 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 OR13A1Q8NGR1 328 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 PPP1R35Q8TAP8 253 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 RTN4IP1Q8WWV3 396 aaPredicted RBP7.87□□□□□ -1.15
SF3B1-211ENST00000487698 IL1F10Q8WWZ1 152 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 LURAP1Q96LR2 239 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 TOLLIPQ9H0E2 274 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 NCOR1P1Q9H4R4 102 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 NAA60Q9H7X0 242 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 KCNIP1Q9NZI2 227 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 A0A1B0GW55 424 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 ODAMA1E959 279 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 LGALS8O00214 317 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 CCSO14618 274 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 CD8AP01732 235 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 DUX4L2P0CJ85 424 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 DUX4L3P0CJ86 424 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 DUX4L4P0CJ87 422 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 DUX4L5P0CJ88 424 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 DUX4L6P0CJ89 424 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 DUX4L7P0CJ90 424 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 SELLP14151 372 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 P2RX3P56373 397 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 SNRPD2P62316 118 aaKnown RBP7.87□□□□□ -1.15
SF3B1-211ENST00000487698 CR1LQ2VPA4 569 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 C6orf183Q5T699 404 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 TRAT1Q6PIZ9 186 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 DUX4L9Q6RFH8 374 aaPredicted RBP7.87□□□□□ -1.15
SF3B1-211ENST00000487698 SGPP2Q8IWX5 399 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 FAM185AQ8N0U4 392 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 C1orf87Q8N0U7 546 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 PRR18Q8N4B5 295 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 C9orf62Q8N4C0 152 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 OR1L1Q8NH94 360 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 COQ8AQ8NI60 647 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 SECTM1Q8WVN6 248 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 RAB18Q9NP72 206 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 TMEM106BQ9NUM4 274 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 PRR13Q9NZ81 148 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 DUX4Q9UBX2 424 aa7.87□□□□□ -1.15
SF3B1-211ENST00000487698 MYO18BQ8IUG5 2567 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 TEX13DA0A0J9YY54 714 aaPredicted RBP7.86□□□□□ -1.15
SF3B1-211ENST00000487698 C15orf65H3BRN8 121 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 C19orf84I3L1E1 186 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 GPR31O00270 319 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 HBZP02008 142 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 PPOXP50336 477 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 EDDM3AQ14507 147 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 PHLDA2Q53GA4 152 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 ZNF818PQ6ZRF7 136 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 KCTD9Q7L273 389 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 CCDC71LQ8N9Z2 235 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 UBALD1Q8TB05 177 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 MRGPRDQ8TDS7 321 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 SLC5A7Q9GZV3 580 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 FAM234AQ9H0X4 552 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 ZNF665Q9H7R5 613 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 PLSCR3Q9NRY6 295 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 ZNF462Q96JM2 2506 aa7.86□□□□□ -1.15
SF3B1-211ENST00000487698 B8ZZF3 427 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 TNFRSF13BO14836 293 aaPredicted RBP7.85□□□□□ -1.15
SF3B1-211ENST00000487698 SIGLEC5O15389 551 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 GYPAP02724 150 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 SSTR5P35346 364 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 TMEM187Q14656 261 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 C11orf71Q6IPW1 123 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 FAM216BQ8N7L0 139 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 ZNF565Q8N9K5 539 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 DEFB108BQ8NET1 73 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 OR5D13Q8NGL4 314 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 GALMQ96C23 342 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 DCTN5Q9BTE1 182 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 SUCNR1Q9BXA5 334 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 PARP12Q9H0J9 701 aaKnown RBP7.85□□□□□ -1.15
SF3B1-211ENST00000487698 DNTTIP1Q9H147 329 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 CCL28Q9NRJ3 127 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 RDH8Q9NYR8 311 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 BOLA1Q9Y3E2 137 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 USF3Q68DE3 2245 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 TRAV38-1A0A0B4J264 116 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 IGHV1-69-2A0A0G2JMI3 117 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 MPPED1O15442 326 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 ADAP1O75689 374 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 IGLV2-14P01704 120 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 OR5AC1P0C628 307 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 CGB3P0DN86 165 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 CGB7P0DN87 165 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 LRTM2Q8N967 370 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 BVESQ8NE79 360 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 OR10V1Q8NGI7 309 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 GRPEL2Q8TAA5 225 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 GLYATL2Q8WU03 294 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 C14orf79Q96F83 325 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 CCL13Q99616 98 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 LRBAP50851 2863 aa7.85□□□□□ -1.15
SF3B1-211ENST00000487698 PPIAL4EA0A075B759 164 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 TRAV14DV4A0A0A6YYC5 116 aa7.84□□□□□ -1.15
SF3B1-211ENST00000487698 A0A1W2PPR1 153 aa7.84□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 56 ms