RNA–Protein interactions for RNA: ENST00000487245.5

HLA-C-208, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 1,880 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-208ENST00000487245 IGHV1-2P23083 117 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 PTAFRP25105 342 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 PPP1CCP36873 323 aaKnown RBP22.17■■□□□ 1.14
HLA-C-208ENST00000487245 HABP2Q14520 560 aaPredicted RBP22.17■■□□□ 1.14
HLA-C-208ENST00000487245 CLINT1Q14677 625 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 SHEQ5VZ18 495 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 ETV3LQ6ZN32 361 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 FAM214BQ7L5A3 538 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 VASH2Q86V25 355 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 KCNJ16Q9NPI9 418 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 RNF115Q9Y4L5 304 aa22.17■■□□□ 1.14
HLA-C-208ENST00000487245 HS3ST1O14792 307 aa22.16■■□□□ 1.14
HLA-C-208ENST00000487245 RAC2P15153 192 aa22.16■■□□□ 1.14
HLA-C-208ENST00000487245 ZNF44P15621 663 aa22.16■■□□□ 1.14
HLA-C-208ENST00000487245 ASCL3Q9NQ33 180 aa22.16■■□□□ 1.14
HLA-C-208ENST00000487245 DMDP11532 3685 aa22.16■■□□□ 1.14
HLA-C-208ENST00000487245 TRAV17A0A0B4J275 112 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 TMEM50AO95807 157 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 ASCL1P50553 236 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 SPATA46Q5T0L3 261 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 SPSB3Q6PJ21 355 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 C20orf204Q6ZNR8 217 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 Q6ZT83 130 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 MOB1BQ7L9L4 216 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 FDCSPQ8NFU4 85 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 OR5C1Q8NGR4 320 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 RDH5Q92781 318 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 MAGT1Q9H0U3 335 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 A0A1B0GU03 582 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 AQP7O14520 342 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 DYNLT3P51808 116 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 GABRA6Q16445 453 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 Q6P435 159 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 DPPA3Q6W0C5 159 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 OR1J1Q8NGS3 322 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 OR10J5Q8NHC4 309 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 TRIB1Q96RU8 372 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 TAAR3PQ9P1P4 343 aa22.15■■□□□ 1.14
HLA-C-208ENST00000487245 C1orf196B1AJZ1 125 aa22.14■■□□□ 1.13
HLA-C-208ENST00000487245 SNRNP70P08621 437 aaKnown RBP22.14■■□□□ 1.13
HLA-C-208ENST00000487245 RPL35P42766 123 aaKnown RBP22.14■■□□□ 1.13
HLA-C-208ENST00000487245 PAX9P55771 341 aa22.14■■□□□ 1.13
HLA-C-208ENST00000487245 GUSBP1Q15486 140 aa22.14■■□□□ 1.13
HLA-C-208ENST00000487245 FBXO7Q9Y3I1 522 aa22.14■■□□□ 1.13
HLA-C-208ENST00000487245 RHBDL1O75783 438 aa22.13■■□□□ 1.13
HLA-C-208ENST00000487245 IDH3GP51553 393 aaPredicted RBP22.13■■□□□ 1.13
HLA-C-208ENST00000487245 AKR1D1P51857 326 aa22.13■■□□□ 1.13
HLA-C-208ENST00000487245 SFT2D1Q8WV19 159 aa22.13■■□□□ 1.13
HLA-C-208ENST00000487245 OR2J1Q9GZK6 312 aa22.13■■□□□ 1.13
HLA-C-208ENST00000487245 KIAA1456Q9P272 454 aa22.13■■□□□ 1.13
HLA-C-208ENST00000487245 IQCF6A8MYZ5 107 aa22.13■■□□□ 1.13
HLA-C-208ENST00000487245 CHST1O43916 411 aa22.13■■□□□ 1.13
HLA-C-208ENST00000487245 MAS1LP35410 378 aa22.13■■□□□ 1.13
HLA-C-208ENST00000487245 IGF2-ASQ6U949 168 aa22.13■■□□□ 1.13
HLA-C-208ENST00000487245 C17orf78Q8N4C9 275 aa22.13■■□□□ 1.13
HLA-C-208ENST00000487245 PARD6AQ9NPB6 346 aa22.13■■□□□ 1.13
HLA-C-208ENST00000487245 SPAARA0A1B0GVQ0 90 aa22.12■■□□□ 1.13
HLA-C-208ENST00000487245 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP22.12■■□□□ 1.13
HLA-C-208ENST00000487245 M0R036 132 aa22.12■■□□□ 1.13
HLA-C-208ENST00000487245 WRBO00258 174 aa22.12■■□□□ 1.13
HLA-C-208ENST00000487245 CELA3BP08861 270 aa22.12■■□□□ 1.13
HLA-C-208ENST00000487245 AGAP20933 346 aa22.12■■□□□ 1.13
HLA-C-208ENST00000487245 ERVK11-1P61568 191 aa22.12■■□□□ 1.13
HLA-C-208ENST00000487245 ZNF561Q8N587 486 aa22.12■■□□□ 1.13
HLA-C-208ENST00000487245 SCCPDHQ8NBX0 429 aa22.12■■□□□ 1.13
HLA-C-208ENST00000487245 LSM10Q969L4 123 aaKnown RBP22.12■■□□□ 1.13
HLA-C-208ENST00000487245 SARAFQ96BY9 339 aa22.12■■□□□ 1.13
HLA-C-208ENST00000487245 GPHA2Q96T91 129 aa22.12■■□□□ 1.13
HLA-C-208ENST00000487245 ATP5SQ99766 215 aa22.12■■□□□ 1.13
HLA-C-208ENST00000487245 UNKLQ9H9P5 680 aaKnown RBP22.12■■□□□ 1.13
HLA-C-208ENST00000487245 RBFOX3A6NFN3 312 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 TMEM210A6NLX4 147 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 KIAA1324LA8MWY0 1029 aaPredicted RBP22.11■■□□□ 1.13
HLA-C-208ENST00000487245 CBR1P16152 277 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 OMGP23515 440 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 AKIRIN2Q53H80 203 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 MED12LQ86YW9 2145 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 C1orf162Q8NEQ5 155 aaPredicted RBP22.11■■□□□ 1.13
HLA-C-208ENST00000487245 GPR146Q96CH1 333 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 MALSU1Q96EH3 234 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 RAB40CQ96S21 281 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 DFFBO76075 338 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 ACAA1P09110 424 aaPredicted RBP22.11■■□□□ 1.13
HLA-C-208ENST00000487245 AKR1C3P42330 323 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 OR10V1Q8NGI7 309 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 SLC25A40Q8TBP6 338 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 C2CD4CQ8TF44 421 aa22.11■■□□□ 1.13
HLA-C-208ENST00000487245 LYZL6O75951 148 aa22.1■■□□□ 1.13
HLA-C-208ENST00000487245 TUBG1P23258 451 aa22.1■■□□□ 1.13
HLA-C-208ENST00000487245 MYPOPQ86VE0 399 aaPredicted RBP22.1■■□□□ 1.13
HLA-C-208ENST00000487245 GCNT2Q8N0V5 402 aa22.1■■□□□ 1.13
HLA-C-208ENST00000487245 ZFP82Q8N141 532 aa22.1■■□□□ 1.13
HLA-C-208ENST00000487245 TUBG2Q9NRH3 451 aa22.1■■□□□ 1.13
HLA-C-208ENST00000487245 CST7O76096 145 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 PGA5P0DJD9 388 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 HOXC12P31275 282 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 TAS2R30P59541 319 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 SOHLH1Q5JUK2 328 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 WDR86Q86TI4 376 aa22.09■■□□□ 1.13
HLA-C-208ENST00000487245 ERRFI1Q9UJM3 462 aaPredicted RBP22.09■■□□□ 1.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms