RNA–Protein interactions for RNA: ENST00000487188.1

VPS13D-209, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 2

Gene VPS13D, Length 3,990 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-209ENST00000487188 MBD3L1Q8WWY6 194 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 ZNF799Q96GE5 643 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 RBM24Q9BX46 236 aaKnown RBP5.39□□□□□ -1.55
VPS13D-209ENST00000487188 A0A1W2PQD3 144 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 NPIPB7O75200 414 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 PDCD6O75340 191 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 ACRP10323 421 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 TDGF1P13385 188 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 TCN2P20062 427 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 HNRNPA2B1P22626 353 aaKnown RBP5.39□□□□□ -1.55
VPS13D-209ENST00000487188 S100A7P31151 101 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 AMTP48728 403 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 PRSS12P56730 875 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 SELENOTP62341 195 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 SLC38A11Q08AI6 406 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 ZP4Q12836 540 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 MYBPHQ13203 477 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 RUNX3Q13761 415 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 PRSS8Q16651 343 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 C9orf50Q5SZB4 431 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 PLCXD3Q63HM9 321 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 SFTPA2Q8IWL1 248 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 GJC3Q8NFK1 279 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 ST8SIA1Q92185 356 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 SPSB1Q96BD6 273 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 IMMP2LQ96T52 175 aa5.39□□□□□ -1.55
VPS13D-209ENST00000487188 PSMG3Q9BT73 122 aaPredicted RBP5.39□□□□□ -1.55
VPS13D-209ENST00000487188 PTRH2Q9Y3E5 179 aaKnown RBP5.39□□□□□ -1.55
VPS13D-209ENST00000487188 KIR2DS5A0A0G2JLQ3 304 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 A0A0G2JNG1 304 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 KIR2DS3K7RE56 304 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 WISP1O95388 367 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 NRASP01111 189 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 KRASP01116 189 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 ADMP35318 185 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 CLDN17P56750 224 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 UBE2NP61088 152 aaKnown RBP5.38□□□□□ -1.55
VPS13D-209ENST00000487188 EIF3IQ13347 325 aaKnown RBP5.38□□□□□ -1.55
VPS13D-209ENST00000487188 KIR2DS5Q14953 304 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 C1orf53Q5VUE5 145 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 FBXW9Q5XUX1 488 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 TCF23Q7RTU1 214 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 TCTEX1D1Q8N7M0 179 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 CACNG5Q9UF02 275 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 TBX21Q9UL17 535 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 CLDN16Q9Y5I7 305 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 EYSQ5T1H1 3165 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 LOC102724200A0A096LPH7 203 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-209ENST00000487188 CTXND1A0A1B0GTU2 59 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 A0A1W2PNR3 127 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 RNF212BA8MTL3 300 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 C11orf94C9JXX5 98 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 SYNGR2O43760 224 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 SERF1AO75920 110 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 POU2F2P09086 479 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 HOXB2P14652 356 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 TMEM11P17152 192 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 MSR1P21757 451 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 EXT1Q16394 746 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 OR10V1Q8NGI7 309 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 OR10G9Q8NGN4 311 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 OR10G7Q8NGN6 311 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 OR2AE1Q8NHA4 323 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 CORO2AQ92828 525 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 BORCS7Q96B45 105 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 GABRG3Q99928 467 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 AGMATQ9BSE5 352 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 CCL28Q9NRJ3 127 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 LAMTOR2Q9Y2Q5 125 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 OR6C6A6NF89 314 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 PRR19A6NJB7 356 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 FAM166BA8MTA8 275 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 KIAA1324LA8MWY0 1029 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-209ENST00000487188 ETV2O00321 342 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-209ENST00000487188 FCN1O00602 326 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 TMEM50AO95807 157 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 CRYAAP02489 173 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 COX5AP20674 150 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 NTF3P20783 257 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 MPLP40238 635 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 C17orf67Q0P5P2 114 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 FFAR4Q5NUL3 377 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 RIPPLY2Q5TAB7 128 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 PNPLA5Q7Z6Z6 429 aaPredicted RBP5.38□□□□□ -1.55
VPS13D-209ENST00000487188 MRPL43Q8N983 215 aaKnown RBP5.38□□□□□ -1.55
VPS13D-209ENST00000487188 PIGCQ92535 297 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 METTL7AQ9H8H3 244 aa5.38□□□□□ -1.55
VPS13D-209ENST00000487188 F5P12259 2224 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 NKX6-3A6NJ46 265 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 A8MXE2 369 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 LILRA1O75019 489 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 CBR3O75828 277 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 CCL1P22362 96 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 CBLN1P23435 193 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 CDKN1AP38936 164 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 ID3Q02535 119 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 OR8B8Q15620 311 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 IZUMO4Q1ZYL8 232 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 Q6ZSR6 202 aa5.37□□□□□ -1.55
VPS13D-209ENST00000487188 LHFPL2Q6ZUX7 228 aa5.37□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms