RNA–Protein interactions for RNA: ENST00000486519.5

U2AF1-211, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 3

Gene U2AF1, Length 682 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-211ENST00000486519 SSX6Q7RTT6 188 aa11.3□□□□□ -0.6
U2AF1-211ENST00000486519 PPP1R27Q86WC6 154 aa11.3□□□□□ -0.6
U2AF1-211ENST00000486519 LAX1Q8IWV1 398 aa11.3□□□□□ -0.6
U2AF1-211ENST00000486519 DNAAF1Q8NEP3 725 aa11.3□□□□□ -0.6
U2AF1-211ENST00000486519 LFNGQ8NES3 379 aa11.3□□□□□ -0.6
U2AF1-211ENST00000486519 TEX47Q8TBZ9 253 aa11.3□□□□□ -0.6
U2AF1-211ENST00000486519 UTP4Q969X6 686 aaKnown RBP11.3□□□□□ -0.6
U2AF1-211ENST00000486519 NR1H4Q96RI1 486 aaPredicted RBP11.3□□□□□ -0.6
U2AF1-211ENST00000486519 ZNF251Q9BRH9 671 aa11.3□□□□□ -0.6
U2AF1-211ENST00000486519 DGCR6LQ9BY27 220 aa11.3□□□□□ -0.6
U2AF1-211ENST00000486519 MRPL20Q9BYC9 149 aaKnown RBP11.3□□□□□ -0.6
U2AF1-211ENST00000486519 CST11Q9H112 138 aa11.3□□□□□ -0.6
U2AF1-211ENST00000486519 NCOR1P1Q9H4R4 102 aa11.3□□□□□ -0.6
U2AF1-211ENST00000486519 SNX5Q9Y5X3 404 aa11.3□□□□□ -0.6
U2AF1-211ENST00000486519 LOC102724200A0A096LPH7 203 aaPredicted RBP11.29□□□□□ -0.6
U2AF1-211ENST00000486519 E2F6O75461 281 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 RBMXL2O75526 392 aaKnown RBP11.29□□□□□ -0.6
U2AF1-211ENST00000486519 CTRB1P17538 263 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 ATF1P18846 271 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 IL3RAP26951 378 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 CXCR4P61073 352 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 DEFB114Q30KQ6 69 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 SLC35D3Q5M8T2 416 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 CTRB2Q6GPI1 263 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 FAHD1Q6P587 224 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 ZNF322Q6U7Q0 402 aaPredicted RBP11.29□□□□□ -0.6
U2AF1-211ENST00000486519 HDXQ7Z353 690 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 C8orf31Q8N9H6 132 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 NPBQ8NG41 125 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 OR10V1Q8NGI7 309 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 OR2K2Q8NGT1 345 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 FBXL17Q9UF56 701 aa11.29□□□□□ -0.6
U2AF1-211ENST00000486519 DMBT1Q9UGM3 2413 aaPredicted RBP11.29□□□□□ -0.6
U2AF1-211ENST00000486519 M0R2N4 97 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 BMI1P35226 326 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 ZNF660Q6AZW8 331 aaPredicted RBP11.28□□□□□ -0.6
U2AF1-211ENST00000486519 PYHIN1Q6K0P9 492 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 TCTEX1D1Q8N7M0 179 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 TCEANCQ8N8B7 351 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 OR10AC1Q8NH08 325 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 CNIH3Q8TBE1 160 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 DYDC1Q8WWB3 177 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 ASB17Q8WXJ9 295 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 ARL11Q969Q4 196 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 MCUR1Q96AQ8 359 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 GORASP2Q9H8Y8 452 aa11.28□□□□□ -0.6
U2AF1-211ENST00000486519 H3BN98 237 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 TXNL1O43396 289 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 LANCL1O43813 399 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 GINS1Q14691 196 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 CGB2Q6NT52 195 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 BCDIN3DQ7Z5W3 292 aaKnown RBP11.27□□□□□ -0.61
U2AF1-211ENST00000486519 Q8N1X5 172 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 PRSS35Q8N3Z0 413 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 OR52M1Q8NGK5 317 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 CCDC107Q8WV48 283 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 OPALINQ96PE5 141 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 HOPXQ9BPY8 73 aaPredicted RBP11.27□□□□□ -0.61
U2AF1-211ENST00000486519 BARHL1Q9BZE3 327 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 ZC4H2Q9NQZ6 224 aa11.27□□□□□ -0.61
U2AF1-211ENST00000486519 C13orf42A0A1B0GVH6 325 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 LOC107986453A0A1B0GWG9 222 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 KRT36O76013 467 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 COX4I1P13073 169 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 PAX5Q02548 391 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 PIGYQ3MUY2 71 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 TMEM236Q5W0B7 351 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 C5orf24Q7Z6I8 188 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 ODF3L1Q8IXM7 274 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 CYYR1Q96J86 154 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 CLCC1Q96S66 551 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 SLA2Q9H6Q3 261 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 NEK6Q9HC98 313 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 SPAG4Q9NPE6 437 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 ERGIC3Q9Y282 383 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 TP53TG1Q9Y2A0 90 aa11.26□□□□□ -0.61
U2AF1-211ENST00000486519 CDK2AP2O75956 126 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 OR2A4O95047 310 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 APOL3O95236 402 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 SERPINA3P01011 423 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 KIR2DS2P43631 304 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 PSME3P61289 254 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 ZSCAN26Q16670 478 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 MICAQ29983 383 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 AKIRIN2Q53H80 203 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 OR5T1Q8NG75 326 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 SCRT2Q9NQ03 307 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 ZNF355PQ9NSJ1 428 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 FAM118AQ9NWS6 357 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 PEF1Q9UBV8 284 aaKnown RBP11.25□□□□□ -0.61
U2AF1-211ENST00000486519 RAB21Q9UL25 225 aa11.25□□□□□ -0.61
U2AF1-211ENST00000486519 IGLL5B9A064 214 aa11.24□□□□□ -0.61
U2AF1-211ENST00000486519 RRHO14718 337 aa11.24□□□□□ -0.61
U2AF1-211ENST00000486519 RPEL1Q2QD12 228 aa11.24□□□□□ -0.61
U2AF1-211ENST00000486519 ZNF343Q6P1L6 599 aa11.24□□□□□ -0.61
U2AF1-211ENST00000486519 Q6ZWC4 215 aa11.24□□□□□ -0.61
U2AF1-211ENST00000486519 SLC35F2Q8IXU6 374 aa11.24□□□□□ -0.61
U2AF1-211ENST00000486519 DYNLRB2Q8TF09 96 aa11.24□□□□□ -0.61
U2AF1-211ENST00000486519 C2CD4CQ8TF44 421 aa11.24□□□□□ -0.61
U2AF1-211ENST00000486519 CACNG8Q8WXS5 425 aa11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms