RNA–Protein interactions for RNA: ENST00000485994.5

VPS50-218, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 573 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-218ENST00000485994 ZNF816Q0VGE8 651 aaPredicted RBP5.6□□□□□ -1.51
VPS50-218ENST00000485994 C2orf68Q2NKX9 166 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 RBM48Q5RL73 367 aaKnown RBP5.6□□□□□ -1.51
VPS50-218ENST00000485994 ATAD3CQ5T2N8 411 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 SIGIRRQ6IA17 410 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 LRRTM1Q86UE6 522 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 JAGN1Q8N5M9 183 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 KCNG3Q8TAE7 436 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 MRGPRDQ8TDS7 321 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 ARL11Q969Q4 196 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 MUL1Q969V5 352 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 ST6GALNAC6Q969X2 333 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 OR5M11Q96RB7 305 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 FAM192AQ9GZU8 254 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 CST11Q9H112 138 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 MBNL3Q9NUK0 354 aaKnown RBP5.6□□□□□ -1.51
VPS50-218ENST00000485994 GFOD1Q9NXC2 390 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 RAB26Q9ULW5 256 aa5.6□□□□□ -1.51
VPS50-218ENST00000485994 PNMA8CA0A1B0GUJ8 204 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 A0A1W2PP11 408 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 A0A1W2PPK0 400 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 SLC22A1O15245 554 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 FGF16O43320 207 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 RGS10O43665 173 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 GAPDHP04406 335 aaKnown RBP5.59□□□□□ -1.51
VPS50-218ENST00000485994 GALP22466 123 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 NFYBP25208 207 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 CD1BP29016 333 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 VHLP40337 213 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 GLP1RP43220 463 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 PSMD7P51665 324 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 QRFPP83859 136 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 HTD2P86397 168 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 CD83Q01151 205 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 MLLT11Q13015 90 aaPredicted RBP5.59□□□□□ -1.51
VPS50-218ENST00000485994 MADCAM1Q13477 382 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 MED22Q15528 200 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 UTF1Q5T230 341 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 C6orf183Q5T699 404 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 SYT6Q5T7P8 510 aaPredicted RBP5.59□□□□□ -1.51
VPS50-218ENST00000485994 SAMD5Q5TGI4 173 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 AWAT2Q6E213 333 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 RAB12Q6IQ22 244 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 IZUMO2Q6UXV1 221 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 TMEM91Q6ZNR0 172 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 FAM89BQ8N5H3 189 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 KLHDC1Q8N7A1 406 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 TMEM104Q8NE00 496 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 RFESDQ8TAC1 157 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 UFD1Q92890 307 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 RPEQ96AT9 228 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 TM2D1Q9BX74 207 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 YTHDF1Q9BYJ9 559 aaKnown RBP5.59□□□□□ -1.51
VPS50-218ENST00000485994 SELENOIQ9C0D9 397 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 ACOT13Q9NPJ3 140 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 ETAA1Q9NY74 926 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 ZNF581Q9P0T4 197 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 SIGLEC9Q9Y336 463 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 PEX16Q9Y5Y5 336 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 MEGF8Q7Z7M0 2845 aa5.59□□□□□ -1.51
VPS50-218ENST00000485994 TRBV6-6A0A0A6YYG2 114 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 A0A1W2PPI3 338 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 TMEM14DPA8MWL7 114 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 AIPO00170 330 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 HSPB6O14558 160 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 SPINT2O43291 252 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 PAX4O43316 350 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 YPEL1O60688 119 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 PDCD6O75340 191 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 CRTAPO75718 401 aaPredicted RBP5.58□□□□□ -1.52
VPS50-218ENST00000485994 ARL6IP5O75915 188 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 OPN1MWP04001 364 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 AMY1AP04745 511 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 AMY2AP04746 511 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 CSF1P09603 554 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 OPN1MW2P0DN77 364 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 OPN1MW3P0DN78 364 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 JUNBP17275 347 aaPredicted RBP5.58□□□□□ -1.52
VPS50-218ENST00000485994 HTR2CP28335 458 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 SSTR5P35346 364 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 RPS27AP62979 156 aaKnown RBP5.58□□□□□ -1.52
VPS50-218ENST00000485994 INSL4Q14641 139 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 HSD17B12Q53GQ0 312 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 ZNF880Q6PDB4 577 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 CD200R1LQ6Q8B3 271 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 Q6ZS46 218 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 SLC25A48Q6ZT89 311 aaKnown RBP5.58□□□□□ -1.52
VPS50-218ENST00000485994 OR2W3Q7Z3T1 314 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 CEACAM19Q7Z692 300 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 TMEM219Q86XT9 240 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 NDUFA11Q86Y39 141 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 ZNF439Q8NDP4 499 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 WFDC9Q8NEX5 89 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 SGCDQ92629 289 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 TOMM40LQ969M1 308 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 YPEL2Q96QA6 119 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 MGLLQ99685 303 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 NKX3-1Q99801 234 aaPredicted RBP5.58□□□□□ -1.52
VPS50-218ENST00000485994 SLC25A33Q9BSK2 321 aa5.58□□□□□ -1.52
VPS50-218ENST00000485994 GHITMQ9H3K2 345 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms