RNA–Protein interactions for RNA: ENST00000485955.1

VPS41-213, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 571 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-213ENST00000485955 OR10G2Q8NGC3 310 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 OR51S1Q8NGJ8 323 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 OR52N1Q8NH53 320 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 OR10J5Q8NHC4 309 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 HAVCR2Q8TDQ0 301 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 DOK4Q8TEW6 326 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 MAFIPQ8WZ33 124 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 LZICQ8WZA0 190 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 ARPC1AQ92747 370 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 PAGE5Q96GU1 130 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 TMEM56Q96MV1 263 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 PHB2Q99623 299 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 OSBPL11Q9BXB4 747 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 UGT2B28Q9BY64 529 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 SIAEQ9HAT2 523 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 LHX9Q9NQ69 397 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 PARVAQ9NVD7 372 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 GIN1Q9NXP7 522 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 GLTPQ9NZD2 209 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 NDRG2Q9UN36 371 aaKnown RBP2.01□□□□□ -2.09
VPS41-213ENST00000485955 TRAPPC4Q9Y296 219 aa2.01□□□□□ -2.09
VPS41-213ENST00000485955 RIC1Q4ADV7 1423 aa2□□□□□ -2.09
VPS41-213ENST00000485955 DDX60Q8IY21 1712 aaKnown RBP2□□□□□ -2.09
VPS41-213ENST00000485955 CENPVL3A0A0U1RRI6 287 aa2□□□□□ -2.09
VPS41-213ENST00000485955 DISC1C4P0D8 188 aa2□□□□□ -2.09
VPS41-213ENST00000485955 AZIN1O14977 448 aa2□□□□□ -2.09
VPS41-213ENST00000485955 MGRN1O60291 552 aa2□□□□□ -2.09
VPS41-213ENST00000485955 UGT2B11O75310 529 aa2□□□□□ -2.09
VPS41-213ENST00000485955 FKBP6O75344 327 aa2□□□□□ -2.09
VPS41-213ENST00000485955 EIF3GO75821 320 aaKnown RBP eCLIP2□□□□□ -2.09
VPS41-213ENST00000485955 GCGP01275 180 aa2□□□□□ -2.09
VPS41-213ENST00000485955 IFNA21P01568 189 aa2□□□□□ -2.09
VPS41-213ENST00000485955 PPBPP02775 128 aa2□□□□□ -2.09
VPS41-213ENST00000485955 MT-ND4P03905 459 aa2□□□□□ -2.09
VPS41-213ENST00000485955 CTSLP07711 333 aa2□□□□□ -2.09
VPS41-213ENST00000485955 CST2P09228 141 aa2□□□□□ -2.09
VPS41-213ENST00000485955 OR5AL1P0C617 328 aa2□□□□□ -2.09
VPS41-213ENST00000485955 NBEAP1P0C6P0 100 aa2□□□□□ -2.09
VPS41-213ENST00000485955 OR8U9P0C7N5 309 aa2□□□□□ -2.09
VPS41-213ENST00000485955 LINC00614P0C842 121 aa2□□□□□ -2.09
VPS41-213ENST00000485955 CT45A6P0DMU7 189 aa2□□□□□ -2.09
VPS41-213ENST00000485955 CT45A5P0DMU8 189 aa2□□□□□ -2.09
VPS41-213ENST00000485955 CT45A7P0DMV0 189 aa2□□□□□ -2.09
VPS41-213ENST00000485955 GTF2F2P13984 249 aa2□□□□□ -2.09
VPS41-213ENST00000485955 GABRG2P18507 467 aa2□□□□□ -2.09
VPS41-213ENST00000485955 ALOX5APP20292 161 aa2□□□□□ -2.09
VPS41-213ENST00000485955 HTR1DP28221 377 aa2□□□□□ -2.09
VPS41-213ENST00000485955 ADORA1P30542 326 aa2□□□□□ -2.09
VPS41-213ENST00000485955 GRPRP30550 384 aa2□□□□□ -2.09
VPS41-213ENST00000485955 SHMT2P34897 504 aa2□□□□□ -2.09
VPS41-213ENST00000485955 MPIP34949 423 aa2□□□□□ -2.09
VPS41-213ENST00000485955 IFNGR2P38484 337 aa2□□□□□ -2.09
VPS41-213ENST00000485955 GLP1RP43220 463 aa2□□□□□ -2.09
VPS41-213ENST00000485955 GABRA4P48169 554 aa2□□□□□ -2.09
VPS41-213ENST00000485955 NMUP48645 174 aa2□□□□□ -2.09
VPS41-213ENST00000485955 ACOT2P49753 483 aa2□□□□□ -2.09
VPS41-213ENST00000485955 GPM6AP51674 278 aa2□□□□□ -2.09
VPS41-213ENST00000485955 SUB1P53999 127 aaKnown RBP eCLIP2□□□□□ -2.09
VPS41-213ENST00000485955 AP1S2P56377 157 aa2□□□□□ -2.09
VPS41-213ENST00000485955 AP1S1P61966 158 aa2□□□□□ -2.09
VPS41-213ENST00000485955 SKP2Q13309 424 aa2□□□□□ -2.09
VPS41-213ENST00000485955 OR2F1Q13607 317 aa2□□□□□ -2.09
VPS41-213ENST00000485955 CLINT1Q14677 625 aa2□□□□□ -2.09
VPS41-213ENST00000485955 OR1Q1Q15612 314 aa2□□□□□ -2.09
VPS41-213ENST00000485955 TOMM34Q15785 309 aaPredicted RBP2□□□□□ -2.09
VPS41-213ENST00000485955 ATP6AP1Q15904 470 aa2□□□□□ -2.09
VPS41-213ENST00000485955 NDUFA5Q16718 116 aa2□□□□□ -2.09
VPS41-213ENST00000485955 RSPO1Q2MKA7 263 aaPredicted RBP2□□□□□ -2.09
VPS41-213ENST00000485955 CT45A1Q5HYN5 189 aa2□□□□□ -2.09
VPS41-213ENST00000485955 TPTE2P1Q5T6R2 138 aa2□□□□□ -2.09
VPS41-213ENST00000485955 NPSR1Q6W5P4 371 aa2□□□□□ -2.09
VPS41-213ENST00000485955 PRSS41Q7RTY9 318 aa2□□□□□ -2.09
VPS41-213ENST00000485955 SLC36A1Q7Z2H8 476 aa2□□□□□ -2.09
VPS41-213ENST00000485955 TMEM150AQ86TG1 271 aa2□□□□□ -2.09
VPS41-213ENST00000485955 DHFR2Q86XF0 187 aa2□□□□□ -2.09
VPS41-213ENST00000485955 CLVS1Q8IUQ0 354 aaPredicted RBP2□□□□□ -2.09
VPS41-213ENST00000485955 DAW1Q8N136 415 aa2□□□□□ -2.09
VPS41-213ENST00000485955 ACOT4Q8N9L9 421 aa2□□□□□ -2.09
VPS41-213ENST00000485955 TMEM161BQ8NDZ6 487 aa2□□□□□ -2.09
VPS41-213ENST00000485955 OR8G5Q8NG78 346 aa2□□□□□ -2.09
VPS41-213ENST00000485955 OR5AR1Q8NGP9 310 aa2□□□□□ -2.09
VPS41-213ENST00000485955 OR8U1Q8NH10 309 aa2□□□□□ -2.09
VPS41-213ENST00000485955 CT45A3Q8NHU0 189 aa2□□□□□ -2.09
VPS41-213ENST00000485955 C16orf78Q8WTQ4 265 aa2□□□□□ -2.09
VPS41-213ENST00000485955 RASSF5Q8WWW0 418 aa2□□□□□ -2.09
VPS41-213ENST00000485955 FGF11Q92914 225 aa2□□□□□ -2.09
VPS41-213ENST00000485955 DNAJC19Q96DA6 116 aa2□□□□□ -2.09
VPS41-213ENST00000485955 MED8Q96G25 268 aa2□□□□□ -2.09
VPS41-213ENST00000485955 COL21A1Q96P44 957 aa2□□□□□ -2.09
VPS41-213ENST00000485955 RBP7Q96R05 134 aa2□□□□□ -2.09
VPS41-213ENST00000485955 DOK1Q99704 481 aa2□□□□□ -2.09
VPS41-213ENST00000485955 KCTD14Q9BQ13 255 aaPredicted RBP2□□□□□ -2.09
VPS41-213ENST00000485955 ZNF2Q9BSG1 426 aaPredicted RBP2□□□□□ -2.09
VPS41-213ENST00000485955 PRORYQ9H606 182 aa2□□□□□ -2.09
VPS41-213ENST00000485955 ZNF442Q9H7R0 627 aa2□□□□□ -2.09
VPS41-213ENST00000485955 ZNF430Q9H8G1 570 aaPredicted RBP2□□□□□ -2.09
VPS41-213ENST00000485955 MYOZ1Q9NP98 299 aaPredicted RBP2□□□□□ -2.09
VPS41-213ENST00000485955 TAS2R13Q9NYV9 303 aa2□□□□□ -2.09
VPS41-213ENST00000485955 CES1P1Q9UKY3 287 aa2□□□□□ -2.09
VPS41-213ENST00000485955 KLF12Q9Y4X4 402 aa2□□□□□ -2.09
Retrieved 100 of 20,778 RNA–protein pairs in 43.9 ms