RNA–Protein interactions for RNA: ENST00000485938.3

CLN5-202, Transcript of CLN5, intracellular trafficking protein, humanhuman

APPRIS ALT2 TSL 2

Gene CLN5, Length 2,341 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN5-202ENST00000485938 RSG1Q9BU20 258 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 CISD1Q9NZ45 108 aaKnown RBP19.19■□□□□ 0.66
CLN5-202ENST00000485938 NOSIPQ9Y314 301 aaKnown RBP19.19■□□□□ 0.66
CLN5-202ENST00000485938 ZNF407Q9C0G0 2248 aa19.19■□□□□ 0.66
CLN5-202ENST00000485938 A0A096LPE4 126 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 TRBV6-6A0A0A6YYG2 114 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 A0A1W2PPZ6 126 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 PSG2P11465 335 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 S100GP29377 79 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 IZUMO4Q1ZYL8 232 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 C9orf135Q5VTT2 229 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 Q6ZRM9 215 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 PINLYPA6NC86 204 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 MRPL33O75394 65 aaKnown RBP19.18■□□□□ 0.66
CLN5-202ENST00000485938 HLA-HP01893 362 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 SERPINE2P07093 398 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 BCL2P10415 239 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 GDF1P27539 372 aa19.18■□□□□ 0.66
CLN5-202ENST00000485938 MRPS18CQ9Y3D5 142 aaKnown RBP19.18■□□□□ 0.66
CLN5-202ENST00000485938 NTN3O00634 580 aaPredicted RBP19.17■□□□□ 0.66
CLN5-202ENST00000485938 SOD3P08294 240 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 ZFP36L1Q07352 338 aaKnown RBP19.17■□□□□ 0.66
CLN5-202ENST00000485938 GFI1BQ5VTD9 330 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 PPP1R32Q7Z5V6 425 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 HIST3H2BBQ8N257 126 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 ZNF383Q8NA42 475 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 OR10J5Q8NHC4 309 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 CDX2Q99626 313 aaPredicted RBP19.17■□□□□ 0.66
CLN5-202ENST00000485938 PRRG4Q9BZD6 226 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 ZNF552Q9H707 407 aaPredicted RBP19.17■□□□□ 0.66
CLN5-202ENST00000485938 ZNF665Q9H7R5 613 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 PILRBQ9UKJ0 227 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 FREM1Q5H8C1 2179 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 CNOT4O95628 575 aaKnown RBP19.17■□□□□ 0.66
CLN5-202ENST00000485938 RND2P52198 227 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 ZNF726P1Q15940 193 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 C9orf152Q5JTZ5 239 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 ZNF787Q6DD87 383 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 OR10D4PQ8NGN7 298 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 MBD3L1Q8WWY6 194 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 APOBEC3DQ96AK3 386 aaPredicted RBP19.17■□□□□ 0.66
CLN5-202ENST00000485938 FAM210BQ96KR6 192 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 OPA3Q9H6K4 179 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 VSIRQ9H7M9 311 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 TMEM242Q9NWH2 141 aa19.17■□□□□ 0.66
CLN5-202ENST00000485938 ERRFI1Q9UJM3 462 aaPredicted RBP19.17■□□□□ 0.66
CLN5-202ENST00000485938 IGKV3D-15A0A087WSY6 115 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 ZFP92A6NM28 416 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 SS18L1O75177 396 aaPredicted RBP19.16■□□□□ 0.66
CLN5-202ENST00000485938 F10P00742 488 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 NKX6-1P78426 367 aaPredicted RBP19.16■□□□□ 0.66
CLN5-202ENST00000485938 PNRC1Q12796 327 aaPredicted RBP19.16■□□□□ 0.66
CLN5-202ENST00000485938 TRA2AQ13595 282 aaKnown RBP eCLIP19.16■□□□□ 0.66
CLN5-202ENST00000485938 ZNF880Q6PDB4 577 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 OR5A2Q8NGI9 324 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 ZNF488Q96MN9 340 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 LINC00470Q9BZP3 86 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 VPS13AQ96RL7 3174 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 ELOA3CA0A087WX78 387 aaPredicted RBP19.16■□□□□ 0.66
CLN5-202ENST00000485938 TRAV24A0A0B4J272 114 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 PIGBOS1A0A0B4J2F0 54 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 ZNF503-AS2A6NEH8 195 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 PPP1R2P9O14990 202 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 IGKV1-39P01597 117 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 IGKV1D-39P04432 117 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 LINC00596Q86U02 117 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 SCGB1C1Q8TD33 95 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 ABHD5Q8WTS1 349 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 PSMF1Q92530 271 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 PFDN5Q99471 154 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 GPR61Q9BZJ8 451 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 PLK3Q9H4B4 646 aa19.16■□□□□ 0.66
CLN5-202ENST00000485938 HS3ST1O14792 307 aa19.15■□□□□ 0.66
CLN5-202ENST00000485938 WNT2P09544 360 aa19.15■□□□□ 0.66
CLN5-202ENST00000485938 OTX2P32243 289 aa19.15■□□□□ 0.66
CLN5-202ENST00000485938 ARL16Q0P5N6 197 aa19.15■□□□□ 0.66
CLN5-202ENST00000485938 LCN15Q6UWW0 184 aa19.15■□□□□ 0.66
CLN5-202ENST00000485938 C1orf87Q8N0U7 546 aa19.15■□□□□ 0.66
CLN5-202ENST00000485938 ZNF525Q8N782 197 aa19.15■□□□□ 0.66
CLN5-202ENST00000485938 CA5BP1Q8WTZ4 195 aa19.15■□□□□ 0.66
CLN5-202ENST00000485938 RDH5Q92781 318 aa19.15■□□□□ 0.66
CLN5-202ENST00000485938 CABLES2Q9BTV7 478 aa19.15■□□□□ 0.66
CLN5-202ENST00000485938 CACNG5Q9UF02 275 aa19.15■□□□□ 0.66
CLN5-202ENST00000485938 NGFP01138 241 aa19.14■□□□□ 0.66
CLN5-202ENST00000485938 OR2T2Q6IF00 324 aa19.14■□□□□ 0.66
CLN5-202ENST00000485938 SSX7Q7RTT5 188 aa19.14■□□□□ 0.66
CLN5-202ENST00000485938 RNASE11Q8TAA1 199 aaKnown RBP19.14■□□□□ 0.66
CLN5-202ENST00000485938 FRZBQ92765 325 aa19.14■□□□□ 0.66
CLN5-202ENST00000485938 PSMG3Q9BT73 122 aaPredicted RBP19.14■□□□□ 0.66
CLN5-202ENST00000485938 CLDN34H7C241 214 aa19.14■□□□□ 0.65
CLN5-202ENST00000485938 SYNGR2O43760 224 aa19.14■□□□□ 0.65
CLN5-202ENST00000485938 CYB5R3P00387 301 aaPredicted RBP19.14■□□□□ 0.65
CLN5-202ENST00000485938 TRGC1P0CF51 173 aa19.14■□□□□ 0.65
CLN5-202ENST00000485938 COX5BP10606 129 aa19.14■□□□□ 0.65
CLN5-202ENST00000485938 FOXG1P55316 489 aaPredicted RBP19.14■□□□□ 0.65
CLN5-202ENST00000485938 OR5P3Q8WZ94 311 aa19.14■□□□□ 0.65
CLN5-202ENST00000485938 LSM10Q969L4 123 aaKnown RBP19.14■□□□□ 0.65
CLN5-202ENST00000485938 HIST1H2AAQ96QV6 131 aa19.14■□□□□ 0.65
CLN5-202ENST00000485938 IGHEP01854 428 aa19.13■□□□□ 0.65
CLN5-202ENST00000485938 HAPLN4Q86UW8 402 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms