RNA–Protein interactions for RNA: ENST00000485842.5

HPS4-214, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 973 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-214ENST00000485842 HBZP02008 142 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 CD3GP09693 182 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 GNB3P16520 340 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 CD34P28906 385 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 MRPS15P82914 257 aaKnown RBP9.61□□□□□ -0.87
HPS4-214ENST00000485842 SSX2Q16385 188 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 CTF1Q16619 201 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 KRTAP21-3Q3LHN1 58 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 FAM53AQ6NSI3 398 aaPredicted RBP9.61□□□□□ -0.87
HPS4-214ENST00000485842 MOB1BQ7L9L4 216 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 C5orf24Q7Z6I8 188 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 LDLRAD3Q86YD5 345 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 CLVS1Q8IUQ0 354 aaPredicted RBP9.61□□□□□ -0.87
HPS4-214ENST00000485842 CROCCP3Q8IVE0 287 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP9.61□□□□□ -0.87
HPS4-214ENST00000485842 OR10A7Q8NGE5 316 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 OR4P4Q8NGL7 312 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 ZNF596Q8TC21 504 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 SSMEM1Q8WWF3 244 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 TMEM158Q8WZ71 300 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 AJUBAQ96IF1 538 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 LINC00574Q9H8X3 128 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 ZMAT3Q9HA38 289 aaKnown RBP9.61□□□□□ -0.87
HPS4-214ENST00000485842 C12orf4Q9NQ89 552 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 GNG12Q9UBI6 72 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 SCOCQ9UIL1 159 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 HILPDAQ9Y5L2 63 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 ETV7Q9Y603 341 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 ATRQ13535 2644 aa9.61□□□□□ -0.87
HPS4-214ENST00000485842 A0A087X0M5 115 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 A0A1B0GX30 115 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 A0A1W2PPE3 182 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 BTBD17A6NE02 478 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 F2RL2O00254 374 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 MFNGO00587 321 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 HIST1H1DP16402 221 aaKnown RBP9.6□□□□□ -0.87
HPS4-214ENST00000485842 HTR1DP28221 377 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 IER3P46695 156 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 RPL5P46777 297 aaKnown RBP9.6□□□□□ -0.87
HPS4-214ENST00000485842 PRRX1P54821 245 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 ARFRP1Q13795 201 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 HLA-DRB5Q30154 266 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 LDLRAD2Q5SZI1 272 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 MINOS1Q5TGZ0 78 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 Q6ZPA2 131 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 DYNAPQ8N1N2 210 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 BEND2Q8NDZ0 799 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 OR10V1Q8NGI7 309 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 OR9G1Q8NH87 305 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 SLC25A46Q96AG3 418 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 PHF21AQ96BD5 680 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 SLC25A38Q96DW6 304 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 CHIAQ9BZP6 476 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 MMP28Q9H239 520 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 DCSTAMPQ9H295 470 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 RIMS4Q9H426 269 aaPredicted RBP9.6□□□□□ -0.87
HPS4-214ENST00000485842 MBNL3Q9NUK0 354 aaKnown RBP9.6□□□□□ -0.87
HPS4-214ENST00000485842 GFOD1Q9NXC2 390 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 ABRACLQ9P1F3 81 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 PSG11Q9UQ72 335 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 MINOS1-NBL1R4GNA1 71 aa9.6□□□□□ -0.87
HPS4-214ENST00000485842 H3BUX3 64 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 J3QR06 171 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 NOL3O60936 208 aaKnown RBP9.59□□□□□ -0.87
HPS4-214ENST00000485842 SCGNO76038 276 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 IGLV1-47P01700 117 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 RNASE1P07998 156 aaKnown RBP9.59□□□□□ -0.87
HPS4-214ENST00000485842 SCAND1P57086 179 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 ACTG1P63261 375 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 HLA-DRB3P79483 266 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 GNMTQ14749 295 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 HMGN3Q15651 99 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 LRRC75BQ2VPJ9 315 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 OR52L2PQ8NGH6 319 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 ZFAND2BQ8WV99 257 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 IL1F10Q8WWZ1 152 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 MDFIQ99750 246 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 SSX3Q99909 188 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 C19orf24Q9BVV8 132 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 DPAGT1Q9H3H5 408 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 DPM3Q9P2X0 92 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 SPATA2Q9UM82 520 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 KCNK7Q9Y2U2 307 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 AMMECR1Q9Y4X0 333 aaPredicted RBP9.59□□□□□ -0.87
HPS4-214ENST00000485842 POMT1Q9Y6A1 747 aa9.59□□□□□ -0.87
HPS4-214ENST00000485842 TRBV6-6A0A0A6YYG2 114 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 SERPINE3A8MV23 424 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 LEUTXA8MZ59 168 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 BUB1B-PAK6H3BSN5 160 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 CLDN34H7C241 214 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 TMEM127O75204 238 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 PPP1CCP36873 323 aaKnown RBP9.58□□□□□ -0.88
HPS4-214ENST00000485842 LOXL3P58215 753 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 ARL6IP1Q15041 203 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 LY6EQ16553 131 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 TMEM30BQ3MIR4 351 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 CDNFQ49AH0 187 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 ZNF880Q6PDB4 577 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 ZNF554Q86TJ5 538 aa9.58□□□□□ -0.88
HPS4-214ENST00000485842 IZUMO1Q8IYV9 350 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms