RNA–Protein interactions for RNA: ENST00000484103.1

NDUFA3-213, Transcript of NADH:ubiquinone oxidoreductase subunit A3, humanhuman

TSL 1 (best)

Gene NDUFA3, Length 541 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDUFA3-213ENST00000484103 STX19Q8N4C7 294 aa15.22■□□□□ 0.03
NDUFA3-213ENST00000484103 OR4K15Q8NH41 348 aa15.22■□□□□ 0.03
NDUFA3-213ENST00000484103 PGLYRP3Q96LB9 341 aa15.22■□□□□ 0.03
NDUFA3-213ENST00000484103 TRAPPC2LQ9UL33 140 aa15.22■□□□□ 0.03
NDUFA3-213ENST00000484103 SLC31A2O15432 143 aa15.21■□□□□ 0.03
NDUFA3-213ENST00000484103 HOXD3P31249 432 aaPredicted RBP15.21■□□□□ 0.03
NDUFA3-213ENST00000484103 RPS11P62280 158 aaKnown RBP eCLIP15.21■□□□□ 0.03
NDUFA3-213ENST00000484103 MPV17LQ2QL34 196 aa15.21■□□□□ 0.03
NDUFA3-213ENST00000484103 KCTD21Q4G0X4 260 aa15.21■□□□□ 0.03
NDUFA3-213ENST00000484103 YIF1BQ5BJH7 314 aa15.21■□□□□ 0.03
NDUFA3-213ENST00000484103 OR8H3Q8N146 312 aa15.21■□□□□ 0.03
NDUFA3-213ENST00000484103 NCOR1P1Q9H4R4 102 aa15.21■□□□□ 0.03
NDUFA3-213ENST00000484103 LINC00574Q9H8X3 128 aa15.21■□□□□ 0.03
NDUFA3-213ENST00000484103 ETAA1Q9NY74 926 aa15.21■□□□□ 0.03
NDUFA3-213ENST00000484103 NOTCH3Q9UM47 2321 aa15.21■□□□□ 0.02
NDUFA3-213ENST00000484103 IGHV1-3A0A0C4DH29 117 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 LINC01548A6NM66 108 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 PTGES3LE9PB15 166 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 C15orf65H3BRN8 121 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 MYL12BO14950 172 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 CRTAPO75718 401 aaPredicted RBP15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 GAPDHP04406 335 aaKnown RBP15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 GZMHP20718 246 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 DOC2BQ14184 412 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 IRF3Q14653 427 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 NHLRC3Q5JS37 347 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 SYT6Q5T7P8 510 aaPredicted RBP15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 RAB12Q6IQ22 244 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 C8orf86Q6ZUL3 223 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 C5orf24Q7Z6I8 188 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 SLC35E3Q7Z769 313 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 LINC00596Q86U02 117 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 THNSL2Q86YJ6 484 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 FAM46BQ96A09 425 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 DUX3Q96PT4 197 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 SELENOIQ9C0D9 397 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 IFT22Q9H7X7 185 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 GFOD1Q9NXC2 390 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 GNG12Q9UBI6 72 aa15.2■□□□□ 0.02
NDUFA3-213ENST00000484103 DNAH3Q8TD57 4116 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 UBE2QL1A1L167 161 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 ZNF736B4DX44 427 aaPredicted RBP15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 MCRIP1C9JLW8 97 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 RGS10O43665 173 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 MRPS14O60783 128 aaKnown RBP15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 ZNF780AO75290 641 aaPredicted RBP15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 MT-ND4P03905 459 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 CELP19835 753 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 ZNF497Q6ZNH5 498 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 PRSS48Q7RTY5 328 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 KLHL30-AS1Q8NEE0 82 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 WFDC9Q8NEX5 89 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 OR10A7Q8NGE5 316 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 OR1L1Q8NH94 360 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 EAF1Q96JC9 268 aaPredicted RBP15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 PEX16Q9Y5Y5 336 aa15.19■□□□□ 0.02
NDUFA3-213ENST00000484103 C12orf77C9JDV5 145 aa15.18■□□□□ 0.02
NDUFA3-213ENST00000484103 RAB25P57735 213 aa15.18■□□□□ 0.02
NDUFA3-213ENST00000484103 PAX5Q02548 391 aa15.18■□□□□ 0.02
NDUFA3-213ENST00000484103 INSL4Q14641 139 aa15.18■□□□□ 0.02
NDUFA3-213ENST00000484103 LCNL1Q6ZST4 164 aa15.18■□□□□ 0.02
NDUFA3-213ENST00000484103 ZNF485Q8NCK3 441 aa15.18■□□□□ 0.02
NDUFA3-213ENST00000484103 TMEM104Q8NE00 496 aa15.18■□□□□ 0.02
NDUFA3-213ENST00000484103 TRBV5-7A0A0A0MS05 114 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 TNFAIP8O95379 198 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 MGMTP16455 207 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 RCC1P18754 421 aaPredicted RBP15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 FSTP19883 344 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 IL3RAP26951 378 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 KRTAP10-11P60412 298 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 RPL23AP62750 156 aaKnown RBP15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 ZNF816Q0VGE8 651 aaPredicted RBP15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 GPR176Q14439 515 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 DEFB121Q5J5C9 76 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 NKAPLQ5M9Q1 402 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 ETV3LQ6ZN32 361 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 SLC16A12Q6ZSM3 486 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 OR2W3Q7Z3T1 314 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 FOXRED2Q8IWF2 684 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 CHPT1Q8WUD6 406 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 RTN4IP1Q8WWV3 396 aaPredicted RBP15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 DERL3Q96Q80 235 aa15.17■□□□□ 0.02
NDUFA3-213ENST00000484103 SPINT2O43291 252 aa15.16■□□□□ 0.02
NDUFA3-213ENST00000484103 ORC5O43913 435 aa15.16■□□□□ 0.02
NDUFA3-213ENST00000484103 HBZP02008 142 aa15.16■□□□□ 0.02
NDUFA3-213ENST00000484103 TAS2R43P59537 309 aa15.16■□□□□ 0.02
NDUFA3-213ENST00000484103 SLC35B1P78383 322 aa15.16■□□□□ 0.02
NDUFA3-213ENST00000484103 MRPL41Q8IXM3 137 aaKnown RBP15.16■□□□□ 0.02
NDUFA3-213ENST00000484103 NANOGP1Q8N7R0 232 aa15.16■□□□□ 0.02
NDUFA3-213ENST00000484103 LINC00482Q8N8I6 264 aa15.16■□□□□ 0.02
NDUFA3-213ENST00000484103 RCC1LQ96I51 464 aaKnown RBP15.16■□□□□ 0.02
NDUFA3-213ENST00000484103 LSM2Q9Y333 95 aaKnown RBP15.16■□□□□ 0.02
NDUFA3-213ENST00000484103 WI2-2373I1.2A0A1W2PRP0 233 aa15.15■□□□□ 0.02
NDUFA3-213ENST00000484103 K7EIL1 84 aa15.15■□□□□ 0.02
NDUFA3-213ENST00000484103 FGF16O43320 207 aa15.15■□□□□ 0.02
NDUFA3-213ENST00000484103 WNT4P56705 351 aa15.15■□□□□ 0.02
NDUFA3-213ENST00000484103 GNMTQ14749 295 aa15.15■□□□□ 0.02
NDUFA3-213ENST00000484103 TBCEQ15813 527 aaPredicted RBP15.15■□□□□ 0.02
NDUFA3-213ENST00000484103 FAM27D1Q5T7N8 215 aa15.15■□□□□ 0.02
NDUFA3-213ENST00000484103 ZNF773Q6PK81 442 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 77.5 ms