RNA–Protein interactions for RNA: ENST00000483851.6

SHOX2-204, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene SHOX2, Length 1,866 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-204ENST00000483851 SHARPINQ9H0F6 387 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 KCNIP3Q9Y2W7 256 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 OOEPA6NGQ2 149 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 LRRC30A6NM36 301 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 IFNA2P01563 188 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 PIGPP57054 158 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 ANKRD55Q3KP44 614 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 H1FOOQ8IZA3 346 aaPredicted RBP21.98■■□□□ 1.11
SHOX2-204ENST00000483851 TMEM204Q9BSN7 226 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 RDH8Q9NYR8 311 aa21.98■■□□□ 1.11
SHOX2-204ENST00000483851 FAM25EA8MYX2 175 aa21.97■■□□□ 1.11
SHOX2-204ENST00000483851 SHOXO15266 292 aa21.97■■□□□ 1.11
SHOX2-204ENST00000483851 MUC1P15941 1255 aaPredicted RBP21.97■■□□□ 1.11
SHOX2-204ENST00000483851 LRRC37A5PQ49AS3 106 aa21.97■■□□□ 1.11
SHOX2-204ENST00000483851 COQ2Q96H96 371 aa21.97■■□□□ 1.11
SHOX2-204ENST00000483851 KIRREL1Q96J84 757 aa21.97■■□□□ 1.11
SHOX2-204ENST00000483851 VRK1Q99986 396 aaPredicted RBP21.97■■□□□ 1.11
SHOX2-204ENST00000483851 NCOR1P1Q9H4R4 102 aa21.97■■□□□ 1.11
SHOX2-204ENST00000483851 SLC2A9Q9NRM0 540 aa21.97■■□□□ 1.11
SHOX2-204ENST00000483851 TEX13DA0A0J9YY54 714 aaPredicted RBP21.96■■□□□ 1.11
SHOX2-204ENST00000483851 CLDN14O95500 239 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 UBA52P62987 128 aaKnown RBP21.96■■□□□ 1.11
SHOX2-204ENST00000483851 CYCSP99999 105 aaKnown RBP21.96■■□□□ 1.11
SHOX2-204ENST00000483851 RTN4IP1Q8WWV3 396 aaPredicted RBP21.96■■□□□ 1.11
SHOX2-204ENST00000483851 LURAP1Q96LR2 239 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 TAF9BQ9HBM6 251 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 CISD1Q9NZ45 108 aaKnown RBP21.96■■□□□ 1.11
SHOX2-204ENST00000483851 OR2W1Q9Y3N9 320 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 MGST3O14880 152 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 BCL2L11O43521 198 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 ZNF205O95201 554 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 PSMB6P28072 239 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 RND3P61587 244 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 SNTB1Q13884 538 aaKnown RBP21.96■■□□□ 1.11
SHOX2-204ENST00000483851 SLC9A3R2Q15599 337 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 KRBOX4Q5JUW0 171 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 TEX36Q5VZQ5 186 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 ZNF561Q8N587 486 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 ZNF565Q8N9K5 539 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 BOLLQ8N9W6 283 aaKnown RBP21.96■■□□□ 1.11
SHOX2-204ENST00000483851 NAA60Q9H7X0 242 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 HCFC1P51610 2035 aa21.96■■□□□ 1.11
SHOX2-204ENST00000483851 RBMXP38159 391 aaKnown RBP21.95■■□□□ 1.1
SHOX2-204ENST00000483851 CCL8P80075 99 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 HOXA4Q00056 320 aaPredicted RBP21.95■■□□□ 1.1
SHOX2-204ENST00000483851 AESQ08117 197 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 C1orf87Q8N0U7 546 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 OR5D13Q8NGL4 314 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 THAP6Q8TBB0 222 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 ST8SIA2Q92186 375 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 SDSLQ96GA7 329 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 RNF126Q9BV68 326 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 SAP30LQ9HAJ7 183 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 DYNLRB1Q9NP97 96 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 METRNQ9UJH8 293 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 ACACBO00763 2458 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 ICE1Q9Y2F5 2266 aa21.95■■□□□ 1.1
SHOX2-204ENST00000483851 C5orf51A6NDU8 294 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 DEFB108AA8MXU0 73 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 RLN2P04090 185 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 GNLYP22749 145 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 MST1LQ2TV78 715 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 SUCNR1Q9BXA5 334 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 MBD2Q9UBB5 411 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 DIDO1Q9BTC0 2240 aaKnown RBP21.94■■□□□ 1.1
SHOX2-204ENST00000483851 NBASA2RRP1 2371 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 MFSD2BA6NFX1 497 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 K7N7A8 449 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 SIAH2O43255 324 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 HEXAP06865 529 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 LOXP28300 417 aaPredicted RBP21.94■■□□□ 1.1
SHOX2-204ENST00000483851 GNRHRP30968 328 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 GABRA2P47869 451 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 IL15RAQ13261 267 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 ZNF672Q499Z4 452 aaPredicted RBP21.94■■□□□ 1.1
SHOX2-204ENST00000483851 STUMQ69YW2 141 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 NEUROG1Q92886 237 aa21.94■■□□□ 1.1
SHOX2-204ENST00000483851 FBXO9Q9UK97 447 aaPredicted RBP21.94■■□□□ 1.1
SHOX2-204ENST00000483851 C13orf42A0A1B0GVH6 325 aa21.93■■□□□ 1.1
SHOX2-204ENST00000483851 GPR31O00270 319 aa21.93■■□□□ 1.1
SHOX2-204ENST00000483851 ADAP1O75689 374 aa21.93■■□□□ 1.1
SHOX2-204ENST00000483851 SPDEFO95238 335 aa21.93■■□□□ 1.1
SHOX2-204ENST00000483851 LYL1P12980 280 aa21.93■■□□□ 1.1
SHOX2-204ENST00000483851 GALMQ96C23 342 aa21.93■■□□□ 1.1
SHOX2-204ENST00000483851 CXorf58Q96LI9 332 aa21.93■■□□□ 1.1
SHOX2-204ENST00000483851 TOLLIPQ9H0E2 274 aa21.93■■□□□ 1.1
SHOX2-204ENST00000483851 FAM234AQ9H0X4 552 aa21.93■■□□□ 1.1
SHOX2-204ENST00000483851 PRR13Q9NZ81 148 aa21.93■■□□□ 1.1
SHOX2-204ENST00000483851 DYSFO75923 2080 aa21.93■■□□□ 1.1
SHOX2-204ENST00000483851 SWI5Q1ZZU3 235 aa21.92■■□□□ 1.1
SHOX2-204ENST00000483851 CR1LQ2VPA4 569 aa21.92■■□□□ 1.1
SHOX2-204ENST00000483851 LDLRAD3Q86YD5 345 aa21.92■■□□□ 1.1
SHOX2-204ENST00000483851 CCDC28AQ8IWP9 274 aa21.92■■□□□ 1.1
SHOX2-204ENST00000483851 ITLN2Q8WWU7 325 aaPredicted RBP21.92■■□□□ 1.1
SHOX2-204ENST00000483851 IL1F10Q8WWZ1 152 aa21.92■■□□□ 1.1
SHOX2-204ENST00000483851 RBPMSQ93062 196 aaKnown RBP21.92■■□□□ 1.1
SHOX2-204ENST00000483851 SLC5A7Q9GZV3 580 aa21.92■■□□□ 1.1
SHOX2-204ENST00000483851 ANKHD1Q8IWZ3 2542 aaKnown RBP21.92■■□□□ 1.1
SHOX2-204ENST00000483851 KANTRA0A1W2PQU2 76 aa21.92■■□□□ 1.1
SHOX2-204ENST00000483851 H0YIZ8 118 aa21.92■■□□□ 1.1
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms