RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 BATF2Q8N1L9 274 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 ST8SIA1Q92185 356 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 LHX4Q969G2 390 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 ANAPC16Q96DE5 110 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 TMEM106BQ9NUM4 274 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 SPTBN5Q9NRC6 3674 aaKnown RBP10.13□□□□□ -0.79
VTI1A-205ENST00000483122 KIR2DS5A0A0G2JLQ3 304 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 A0A0G2JNG1 304 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 A0A0U1RQV5 110 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 A0A1W2PNR3 127 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 LNP1A1A4G5 178 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 KIR2DS3K7RE56 304 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 IGKV1D-33P01593 117 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 IGKV1-33P01594 117 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 CHRNB4P30926 498 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 SRP14P37108 136 aaKnown RBP10.13□□□□□ -0.79
VTI1A-205ENST00000483122 CDKN1AP38936 164 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 KIR2DL1P43626 348 aaPredicted RBP10.13□□□□□ -0.79
VTI1A-205ENST00000483122 PRDX4Q13162 271 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 KIR2DS5Q14953 304 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 TMEM41BQ5BJD5 291 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 ZNF525Q8N782 197 aa10.13□□□□□ -0.79
VTI1A-205ENST00000483122 MRPL30Q8TCC3 161 aaKnown RBP10.13□□□□□ -0.79
VTI1A-205ENST00000483122 REPIN1Q9BWE0 567 aaKnown RBP10.13□□□□□ -0.79
VTI1A-205ENST00000483122 MED12Q93074 2177 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 IGKV1D-13A0A0B4J2D9 117 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 A0A0U1RQK1 487 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 ZNF320A2RRD8 509 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 GRIFINA4D1Z8 144 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 TRAPPC6AO75865 159 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 TNFP01375 233 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 IGKV1-13P0DP09 117 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 IAPPP10997 89 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 FBXW4P57775 412 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 SNAI3Q3KNW1 292 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 COL5A1-AS1Q5SY13 56 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 HAPLN4Q86UW8 402 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 MYPOPQ86VE0 399 aaPredicted RBP10.12□□□□□ -0.79
VTI1A-205ENST00000483122 OR13H1Q8NG92 308 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 OR2AE1Q8NHA4 323 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 MSL2Q9HCI7 577 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 AURKAIP1Q9NWT8 199 aaPredicted RBP10.12□□□□□ -0.79
VTI1A-205ENST00000483122 VSTM2BA6NLU5 285 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 B4DGG1 531 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 TCN2P20062 427 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 CTSSP25774 331 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 UCP1P25874 307 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 MLF1P58340 268 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 KCNMB1Q16558 191 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 SLC22A18ASQ8N1D0 253 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 ZNF441Q8N8Z8 693 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 OR4F5Q8NH21 305 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 CMTM2Q8TAZ6 248 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 OR4F4Q96R69 305 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 IMMP2LQ96T52 175 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 PSMG3Q9BT73 122 aaPredicted RBP10.12□□□□□ -0.79
VTI1A-205ENST00000483122 PCED1AQ9H1Q7 454 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 SLC39A9Q9NUM3 307 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 SOHLH2Q9NX45 425 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 ST3GAL6Q9Y274 331 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 PXMP4Q9Y6I8 212 aa10.12□□□□□ -0.79
VTI1A-205ENST00000483122 THADAQ6YHU6 1953 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 KIAA1324LA8MWY0 1029 aaPredicted RBP10.11□□□□□ -0.79
VTI1A-205ENST00000483122 NDUFB8O95169 186 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 ADMP35318 185 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 FOXL2P58012 376 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 SSPNQ14714 243 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 NSDHLQ15738 373 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 TCF23Q7RTU1 214 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 OSR2Q8N2R0 312 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 RPP25LQ8N5L8 163 aaKnown RBP10.11□□□□□ -0.79
VTI1A-205ENST00000483122 VN1R17PQ8TDU5 208 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 GPR146Q96CH1 333 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 WDYHV1Q96HA8 205 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 RPP25Q9BUL9 199 aaKnown RBP10.11□□□□□ -0.79
VTI1A-205ENST00000483122 ZNF442Q9H7R0 627 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 CCL28Q9NRJ3 127 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 TP53TG3Q9ULZ0 132 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 COL5A1P20908 1838 aaPredicted RBP10.11□□□□□ -0.79
VTI1A-205ENST00000483122 DOCK11Q5JSL3 2073 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 A0A1W2PQF6 199 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 A0A1W2PR80 420 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 CCL25O15444 150 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 MMDQ15546 238 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 TMEM183BQ1AE95 376 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 LRRC75BQ2VPJ9 315 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 KCNIP4Q6PIL6 250 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 CPEB3Q8NE35 698 aaKnown RBP10.11□□□□□ -0.79
VTI1A-205ENST00000483122 OR1N1Q8NGS0 311 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 THAP3Q8WTV1 239 aaPredicted RBP10.11□□□□□ -0.79
VTI1A-205ENST00000483122 GABRG3Q99928 467 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 VAMP8Q9BV40 100 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 RBM24Q9BX46 236 aaKnown RBP10.11□□□□□ -0.79
VTI1A-205ENST00000483122 COPS7AQ9UBW8 275 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 RNF150Q9ULK6 438 aa10.11□□□□□ -0.79
VTI1A-205ENST00000483122 TCRBV21S2A2A0A5A6 115 aa10.1□□□□□ -0.79
VTI1A-205ENST00000483122 TMEM250H0YL14 139 aa10.1□□□□□ -0.79
VTI1A-205ENST00000483122 PDGFBP01127 241 aaPredicted RBP10.1□□□□□ -0.79
VTI1A-205ENST00000483122 TDGF1P13385 188 aa10.1□□□□□ -0.79
VTI1A-205ENST00000483122 GFERP55789 205 aa10.1□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms