RNA–Protein interactions for RNA: ENST00000481999.1

CHD3-211, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 2

Gene CHD3, Length 2,515 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-211ENST00000481999 DPPA2Q7Z7J5 298 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 LYPD6BQ8NI32 183 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 TMED3Q9Y3Q3 217 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 IGHV2OR16-5A0A0B4J2B6 119 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A10PA6NDY2 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A18PA6NE21 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A16PA6NEW6 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A20PA6NIJ5 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A8PA6NJQ4 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A7PA6NKC0 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 OR5H1A6NKK0 313 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A22PA8MWA6 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A12PA8MX19 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A5PA8MXJ8 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A23PA8MXZ1 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 AGPAT2O15120 278 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 ST8SIA3O43173 380 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A15PP0C7V4 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 SEC11BP0C7V7 166 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A13PP0C7W8 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A14PP0C7W9 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM90A24PP0C7X0 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 AADACP22760 399 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 CD80P33681 288 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 P2RY1P47900 373 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 SRPXP78539 464 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 HERPUD1Q15011 391 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 TBR1Q16650 682 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 PRAMEF6Q5VXH4 476 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 VHLLQ6RSH7 139 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 ZNF573Q86YE8 665 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 FAM58AQ8N1B3 248 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 SUMF2Q8NBJ7 301 aa12.24□□□□□ -0.45
CHD3-211ENST00000481999 SIRPB1O00241 398 aa12.23□□□□□ -0.45
CHD3-211ENST00000481999 PHF1O43189 567 aaPredicted RBP12.23□□□□□ -0.45
CHD3-211ENST00000481999 ZNF44P15621 663 aa12.23□□□□□ -0.45
CHD3-211ENST00000481999 C1orf185Q5T7R7 199 aa12.23□□□□□ -0.45
CHD3-211ENST00000481999 FAM185AQ8N0U4 392 aa12.23□□□□□ -0.45
CHD3-211ENST00000481999 KIRREL1Q96J84 757 aa12.23□□□□□ -0.45
CHD3-211ENST00000481999 OPA3Q9H6K4 179 aa12.23□□□□□ -0.45
CHD3-211ENST00000481999 SVEP1Q4LDE5 3571 aa12.23□□□□□ -0.45
CHD3-211ENST00000481999 TACC2O95359 2948 aa12.23□□□□□ -0.45
CHD3-211ENST00000481999 OR5B21A6NL26 309 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 M0R1B8 84 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 CNOT4O95628 575 aaKnown RBP12.22□□□□□ -0.45
CHD3-211ENST00000481999 PPYP01298 95 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 SPRNQ5BIV9 151 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 PRR18Q8N4B5 295 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 COMMD1Q8N668 190 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 ASH1LQ9NR48 2969 aaKnown RBP12.22□□□□□ -0.45
CHD3-211ENST00000481999 RAXQ9Y2V3 346 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 SLC25A15Q9Y619 301 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 IGKV1-6A0A0C4DH72 117 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 TSPAN15O95858 294 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 OR8U9P0C7N5 309 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 RAC2P15153 192 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 Q6ZS49 121 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 OR8U1Q8NH10 309 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 GINS3Q9BRX5 216 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 OR14J1Q9UGF5 321 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 DUSP13Q9UII6 198 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 SSUH2Q9Y2M2 353 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 ACACBO00763 2458 aa12.22□□□□□ -0.45
CHD3-211ENST00000481999 FAM157AC9JC47 383 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 PRSS44E7EML9 344 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 IGLV1-44P01699 117 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 CRYABP02511 175 aaKnown RBP12.21□□□□□ -0.45
CHD3-211ENST00000481999 DANCRP0C864 163 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 IL24Q13007 206 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 OR8G1Q15617 311 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 HMGN3Q15651 99 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 ZNF324BQ6AW86 544 aaPredicted RBP12.21□□□□□ -0.45
CHD3-211ENST00000481999 DOLPP1Q86YN1 238 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 OR52M1Q8NGK5 317 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 SNRNP40Q96DI7 357 aaKnown RBP12.21□□□□□ -0.45
CHD3-211ENST00000481999 RTL8AQ9BWD3 113 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 SAV1Q9H4B6 383 aaPredicted RBP12.21□□□□□ -0.45
CHD3-211ENST00000481999 C3orf85A0A1B0GTC6 90 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 IQCF6A8MYZ5 107 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 K7ENP7 123 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 MPPED1O15442 326 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 TIMM8AO60220 97 aaPredicted RBP12.21□□□□□ -0.45
CHD3-211ENST00000481999 NAPSAO96009 420 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 GLAP06280 429 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 TDGF1P3P51864 188 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 SRSF7Q16629 238 aaKnown RBP eCLIP12.21□□□□□ -0.45
CHD3-211ENST00000481999 BEND4Q6ZU67 534 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 SAXO1Q8IYX7 474 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 SLC35G3Q8N808 338 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 BSCL2Q96G97 398 aaPredicted RBP12.21□□□□□ -0.45
CHD3-211ENST00000481999 KLF2Q9Y5W3 355 aaPredicted RBP12.21□□□□□ -0.45
CHD3-211ENST00000481999 KPTNQ9Y664 436 aa12.21□□□□□ -0.45
CHD3-211ENST00000481999 J3QT63 122 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 ATXN7O15265 892 aaPredicted RBP12.2□□□□□ -0.46
CHD3-211ENST00000481999 CDS2O95674 445 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 SPP1P10451 314 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 RAB5CP51148 216 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 GNMTQ14749 295 aa12.2□□□□□ -0.46
CHD3-211ENST00000481999 FAM53AQ6NSI3 398 aaPredicted RBP12.2□□□□□ -0.46
CHD3-211ENST00000481999 CLEC9AQ6UXN8 241 aa12.2□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms