RNA–Protein interactions for RNA: ENST00000481194.1

CCM2-214, Transcript of CCM2 scaffold protein, humanhuman

TSL 1 (best)

Gene CCM2, Length 5,304 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-214ENST00000481194 Q9N2K0 584 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 C1RLQ9NZP8 487 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 RAB29O14966 203 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 CDS2O95674 445 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 HBZP02008 142 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 P2RY4P51582 365 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 R3HDM4Q96D70 268 aa16.47■□□□□ 0.23
CCM2-214ENST00000481194 BPIFB3P59826 476 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 MITD1Q8WV92 249 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 ABHD14AQ9BUJ0 271 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 JPT1Q9UK76 154 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 IGHV1-18A0A0C4DH31 117 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 ODAMA1E959 279 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 ZNF729A6NN14 1252 aaPredicted RBP16.46■□□□□ 0.23
CCM2-214ENST00000481194 K7N7A8 449 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 CD74P04233 296 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 WBP1Q96G27 269 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 COL4A3Q01955 1670 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 HMSDA8MTL9 139 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 ZNF205O95201 554 aa16.46■□□□□ 0.23
CCM2-214ENST00000481194 TAS2R45P59539 299 aa16.46■□□□□ 0.22
CCM2-214ENST00000481194 MBNL2Q5VZF2 373 aaKnown RBP16.46■□□□□ 0.22
CCM2-214ENST00000481194 ACP7Q6ZNF0 438 aa16.46■□□□□ 0.22
CCM2-214ENST00000481194 LURAP1Q96LR2 239 aa16.46■□□□□ 0.22
CCM2-214ENST00000481194 CACNG5Q9UF02 275 aa16.46■□□□□ 0.22
CCM2-214ENST00000481194 MAGT1Q9H0U3 335 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 GCM1Q9NP62 436 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 MELTFP08582 738 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 ATP6V1FQ16864 119 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 BAP18Q8IXM2 172 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 IDI2-AS1Q9NZ38 188 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 PRR32B1ATL7 298 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 FOXF2Q12947 444 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 SNTB1Q13884 538 aaKnown RBP16.45■□□□□ 0.22
CCM2-214ENST00000481194 PXDC1Q5TGL8 231 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 MOB3AQ96BX8 217 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 LYZL4Q96KX0 146 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 A0A1B0GU03 582 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 A0A1W2PN81 502 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 CELA3BP08861 270 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 CHRNA7P36544 502 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 LY6DQ14210 128 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 SLC2A8Q9NY64 477 aa16.45■□□□□ 0.22
CCM2-214ENST00000481194 C7orf66A4D0T2 115 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 CYB5R3P00387 301 aaPredicted RBP16.44■□□□□ 0.22
CCM2-214ENST00000481194 SPRY4Q9C004 299 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 PRNDQ9UKY0 176 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 VSIG4Q9Y279 399 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 SSX4O60224 188 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 SSX5O60225 188 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 OR2B8PP59922 312 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 F6UZH7 168 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 ERVH48-1M5A8F1 160 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 ZNF645Q8N7E2 425 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 SHISA3A0PJX4 238 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 MPC2O95563 127 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 P2RX3P56373 397 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 CCL19Q99731 98 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 TECTAO75443 2155 aa16.44■□□□□ 0.22
CCM2-214ENST00000481194 NCBP2LA6PVI3 153 aaKnown RBP16.43■□□□□ 0.22
CCM2-214ENST00000481194 AGPAT2O15120 278 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 NQO2P16083 231 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 COX5AP20674 150 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 F2RP25116 425 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 CA7P43166 264 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 ZNF154Q13106 437 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 IGFL2Q6UWQ7 119 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 ZNHIT1O43257 154 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 RNFT1Q5M7Z0 435 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 FAM222BQ8WU58 562 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 SPSB4Q96A44 273 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 ACTR3CQ9C0K3 210 aaPredicted RBP16.43■□□□□ 0.22
CCM2-214ENST00000481194 TMEM106BQ9NUM4 274 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 H0Y980 276 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 P2RY1P47900 373 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 UCP3P55916 312 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 ASPHD2Q6ICH7 369 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 PNRC2Q9NPJ4 139 aaKnown RBP16.43■□□□□ 0.22
CCM2-214ENST00000481194 CALYQ9NYX4 217 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 C17orf100A8MU93 164 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 E9PQ18 207 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 CEACAM4O75871 244 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 UNC119Q13432 240 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 GSX2Q9BZM3 304 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 UMAD1C9J7I0 102 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 NPBWR2P48146 333 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 ERVS71-1P61550 626 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 SLC25A15Q9Y619 301 aa16.43■□□□□ 0.22
CCM2-214ENST00000481194 HOXD11P31277 338 aaPredicted RBP16.42■□□□□ 0.22
CCM2-214ENST00000481194 PSMB3P49720 205 aa16.42■□□□□ 0.22
CCM2-214ENST00000481194 HPSE2Q8WWQ2 592 aa16.42■□□□□ 0.22
CCM2-214ENST00000481194 TM4SF5O14894 197 aa16.42■□□□□ 0.22
CCM2-214ENST00000481194 C3orf36Q3SXR2 165 aa16.42■□□□□ 0.22
CCM2-214ENST00000481194 ZNF649Q9BS31 505 aa16.42■□□□□ 0.22
CCM2-214ENST00000481194 NPDC1Q9NQX5 325 aaPredicted RBP16.42■□□□□ 0.22
CCM2-214ENST00000481194 LILRB4Q8NHJ6 448 aa16.42■□□□□ 0.22
CCM2-214ENST00000481194 NEURL2Q9BR09 285 aa16.42■□□□□ 0.22
CCM2-214ENST00000481194 OR51I2Q9H344 312 aa16.42■□□□□ 0.22
CCM2-214ENST00000481194 GPR132Q9UNW8 380 aa16.42■□□□□ 0.22
CCM2-214ENST00000481194 CRYZL1O95825 349 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms