RNA–Protein interactions for RNA: ENST00000480614.1

VEGFA-212, Transcript of vascular endothelial growth factor A, humanhuman

TSL 1 (best)

Gene VEGFA, Length 12,167 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VEGFA-212ENST00000480614 FAM209AQ5JX71 171 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 TMEM251Q8N6I4 163 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 OR4P4Q8NGL7 312 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 RAB33BQ9H082 229 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 STPG3Q8N7X2 389 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 MUC4Q99102 2169 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 LEUTXA8MZ59 168 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 HPXP02790 462 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 EBLN2Q6P2I7 272 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 C1orf210Q8IVY1 113 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 OR8D4Q8NGM9 314 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 FLYWCH2Q96CP2 140 aaKnown RBP8.41□□□□□ -1.06
VEGFA-212ENST00000480614 ABCA2Q9BZC7 2435 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 ZNF735P0CB33 412 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 ZNF793Q6ZN11 406 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 WDR54Q9H977 334 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 LHX9Q9NQ69 397 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 TRAV34A0A0B4J273 112 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 NPIPB6E9PJ23 425 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 J3QT63 122 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 SNRPEP62304 92 aaKnown RBP8.41□□□□□ -1.06
VEGFA-212ENST00000480614 GUSBP11Q6P575 273 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 INO80CQ6PI98 192 aaPredicted RBP8.41□□□□□ -1.06
VEGFA-212ENST00000480614 PLSCR3Q9NRY6 295 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 COL5A3P25940 1745 aaPredicted RBP8.41□□□□□ -1.06
VEGFA-212ENST00000480614 CTDSPLO15194 276 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 ACAA1P09110 424 aaPredicted RBP8.41□□□□□ -1.06
VEGFA-212ENST00000480614 HYAL1Q12794 435 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 NUDT8Q8WV74 236 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 CHST5Q9GZS9 411 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 ASCL3Q9NQ33 180 aa8.41□□□□□ -1.06
VEGFA-212ENST00000480614 K7N7A8 449 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 RPLP1P05386 114 aaKnown RBP8.4□□□□□ -1.06
VEGFA-212ENST00000480614 C6orf201Q7Z4U5 140 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 DYRK2Q92630 601 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 RND1Q92730 232 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 ZNF665Q9H7R5 613 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 SPINK4O60575 86 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 PMELP40967 661 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 TIAL1Q01085 375 aaKnown RBP eCLIP8.4□□□□□ -1.063e-10■□□□□ 9.2
VEGFA-212ENST00000480614 PSG5Q15238 335 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 BVESQ8NE79 360 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 WDR13Q9H1Z4 485 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 INSIG2Q9Y5U4 225 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 LIPT2A6NK58 231 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 SELENOTP62341 195 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 OR8B12Q8NGG6 310 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 MOB4Q9Y3A3 225 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 HYPMO75409 117 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 MMP9P14780 707 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 BTF3P20290 206 aaKnown RBP8.4□□□□□ -1.06
VEGFA-212ENST00000480614 RPS20P60866 119 aaKnown RBP8.4□□□□□ -1.06
VEGFA-212ENST00000480614 RAB37Q96AX2 223 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 CXCL16Q9H2A7 254 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 COL24A1Q17RW2 1714 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 SBF2Q86WG5 1849 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 UBE2L6O14933 153 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 TMEM33P57088 247 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 ERVFRD-1P60508 538 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 ABHD14BQ96IU4 210 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 MPDU1O75352 247 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 MT-ND6P03923 174 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 B4GALNT1Q00973 533 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 CIRBPQ14011 172 aaKnown RBP8.4□□□□□ -1.06
VEGFA-212ENST00000480614 HES3Q5TGS1 186 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 TMPRSS13Q9BYE2 586 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 RNF7Q9UBF6 113 aa8.4□□□□□ -1.06
VEGFA-212ENST00000480614 A8MWL6 223 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 B2MP61769 119 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 CT55Q8WUE5 264 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 PRSS36Q5K4E3 855 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 OR2H1Q9GZK4 316 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 CRISPLD2Q9H0B8 497 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 MS4A5Q9H3V2 200 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 CTSVO60911 334 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 SRSF10O75494 262 aaKnown RBP8.4□□□□□ -1.07
VEGFA-212ENST00000480614 PNLIPP16233 465 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 RAE1P78406 368 aaKnown RBP8.4□□□□□ -1.07
VEGFA-212ENST00000480614 SERF2P84101 59 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 ZNF345Q14585 488 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 AWAT1Q58HT5 328 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 C16orf82Q7Z2V1 217 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 GMPPAQ96IJ6 420 aaPredicted RBP8.4□□□□□ -1.07
VEGFA-212ENST00000480614 ZNF831Q5JPB2 1677 aa8.4□□□□□ -1.07
VEGFA-212ENST00000480614 RPL29P47914 159 aaKnown RBP8.39□□□□□ -1.07
VEGFA-212ENST00000480614 TM4SF20Q53R12 229 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 LRRC3BQ96PB8 259 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 LPAR5Q9H1C0 372 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 UBTD1Q9HAC8 227 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 OR2W1Q9Y3N9 320 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 ZNF253O75346 499 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 NXPH1P58417 271 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 TMEM30BQ3MIR4 351 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 LOC285556D6RIA3 1793 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 CDKN2AP42771 156 aaKnown RBP8.39□□□□□ -1.07
VEGFA-212ENST00000480614 ECSCRQ19T08 205 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 SMUG1Q53HV7 270 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 CLN8Q9UBY8 286 aa8.39□□□□□ -1.07
VEGFA-212ENST00000480614 NYNRINQ9P2P1 1898 aaKnown RBP8.39□□□□□ -1.07
VEGFA-212ENST00000480614 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP8.39□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms