RNA–Protein interactions for RNA: ENST00000480468.1

SIK3-210, Transcript of SIK family kinase 3, humanhuman

TSL 1 (best)

Gene SIK3, Length 2,237 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIK3-210ENST00000480468 OSR2Q8N2R0 312 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 METTL27Q8N6F8 245 aaPredicted RBP9.13□□□□□ -0.95
SIK3-210ENST00000480468 NUDT22Q9BRQ3 303 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 OBP2AQ9NY56 170 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 CHD3Q12873 2000 aaKnown RBP9.13□□□□□ -0.95
SIK3-210ENST00000480468 CTXND1A0A1B0GTU2 59 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 A8MXE2 369 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 WNT2P09544 360 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 MPLP40238 635 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 SPIN3Q5JUX0 258 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 LHFPL2Q6ZUX7 228 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 DTX1Q86Y01 620 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 GAPTQ8N292 157 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 RPP25LQ8N5L8 163 aaKnown RBP9.13□□□□□ -0.95
SIK3-210ENST00000480468 GJC3Q8NFK1 279 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 NAT6Q93015 286 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 RNF2Q99496 336 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 HSPB9Q9BQS6 159 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 UQCR10Q9UDW1 63 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 LRP4O75096 1905 aa9.13□□□□□ -0.95
SIK3-210ENST00000480468 TRAV9-1A0A075B6T8 112 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 A0A1B0GUS0 222 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 SPRY1O43609 319 aaPredicted RBP9.12□□□□□ -0.95
SIK3-210ENST00000480468 TUSC2O75896 110 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 OR5G3P0C626 314 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 LINC00310P59036 64 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 YPEL5P62699 121 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 DLX2Q07687 328 aaPredicted RBP9.12□□□□□ -0.95
SIK3-210ENST00000480468 C17orf67Q0P5P2 114 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 RUNX3Q13761 415 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 MSMO1Q15800 293 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 ATP6V1FQ16864 119 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 C20orf196Q8IYI0 205 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 STPG4Q8N801 248 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 OR5AU1Q8NGC0 362 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 OR4F5Q8NH21 305 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 TAF15Q92804 592 aaKnown RBP eCLIP9.12□□□□□ -0.95
SIK3-210ENST00000480468 OR4F4Q96R69 305 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 ELOVL5Q9NYP7 299 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 COPS7AQ9UBW8 275 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 TP53TG3Q9ULZ0 132 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 IGKV1-27A0A075B6S5 117 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 ZNF814B7Z6K7 855 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 F6UZH7 168 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 H3BP45 60 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 SLC33A1O00400 549 aaPredicted RBP9.12□□□□□ -0.95
SIK3-210ENST00000480468 NXPH2O95156 264 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 DRD1P21728 446 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 ADMP35318 185 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 EFNA3P52797 238 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 ARL16Q0P5N6 197 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 MYBPHQ13203 477 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 MORN2Q502X0 79 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.12□□□□□ -0.95
SIK3-210ENST00000480468 LINC01551Q86U37 167 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 HAPLN4Q86UW8 402 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 VN1R17PQ8TDU5 208 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 GPR146Q96CH1 333 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 ZNF552Q9H707 407 aaPredicted RBP9.12□□□□□ -0.95
SIK3-210ENST00000480468 FBRSQ9HAH7 460 aa9.12□□□□□ -0.95
SIK3-210ENST00000480468 RYDENQ9NUL5 291 aaKnown RBP9.12□□□□□ -0.95
SIK3-210ENST00000480468 SLC22A20A6NK97 555 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 F5H5K5 113 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 SYNGR2O43760 224 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 HNF1AP20823 631 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 MSR1P21757 451 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 CDKN1AP38936 164 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 HHEXQ03014 270 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 Q0VG73 95 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 SHBQ15464 509 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 MMDQ15546 238 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 PIGYQ3MUY2 71 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 SLC25A53Q5H9E4 307 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 SFTPA2Q8IWL1 248 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 C1orf174Q8IYL3 243 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 OR5P3Q8WZ94 311 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 LSM10Q969L4 123 aaKnown RBP9.11□□□□□ -0.95
SIK3-210ENST00000480468 GMPPAQ96IJ6 420 aaPredicted RBP9.11□□□□□ -0.95
SIK3-210ENST00000480468 ALKBH7Q9BT30 221 aaPredicted RBP9.11□□□□□ -0.95
SIK3-210ENST00000480468 STRADBQ9C0K7 418 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 ZNF703Q9H7S9 590 aaPredicted RBP9.11□□□□□ -0.95
SIK3-210ENST00000480468 ST3GAL6Q9Y274 331 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 LAMTOR2Q9Y2Q5 125 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 LOC102725191A0A1B0GVB3 256 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 TIAF1O95411 115 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 NRASP01111 189 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 KRASP01116 189 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 TNFP01375 233 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 IGKV1D-33P01593 117 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 IGKV1-33P01594 117 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 LHX2P50458 406 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 RPS18P62269 152 aaKnown RBP9.11□□□□□ -0.95
SIK3-210ENST00000480468 RSPO1Q2MKA7 263 aaPredicted RBP9.11□□□□□ -0.95
SIK3-210ENST00000480468 OR8G2PQ6IF36 304 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 FOXL2NBQ6ZUU3 175 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 SMIM15Q7Z3B0 74 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 CALHM1Q8IU99 346 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 OXGR1Q96P68 337 aa9.11□□□□□ -0.95
SIK3-210ENST00000480468 ALKBH3Q96Q83 286 aaPredicted RBP9.11□□□□□ -0.95
SIK3-210ENST00000480468 OR4C12Q96R67 309 aa9.11□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 84.5 ms