RNA–Protein interactions for RNA: ENST00000480210.1

USP54-212, Transcript of ubiquitin specific peptidase 54, humanhuman

TSL 2

Gene USP54, Length 640 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP54-212ENST00000480210 ETV7Q9Y603 341 aa6.85□□□□□ -1.31
USP54-212ENST00000480210 CSPG4Q6UVK1 2322 aa6.85□□□□□ -1.31
USP54-212ENST00000480210 CSMD1Q96PZ7 3565 aa6.85□□□□□ -1.31
USP54-212ENST00000480210 VPS13CQ709C8 3753 aa6.85□□□□□ -1.31
USP54-212ENST00000480210 ABCA2Q9BZC7 2435 aa6.85□□□□□ -1.31
USP54-212ENST00000480210 A0A0A6YYH2 397 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 IGHV2-70DA0A0C4DH43 119 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 hADV38S2A0JD32 116 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 A6NJ64 397 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 A8MV72 311 aaPredicted RBP6.84□□□□□ -1.31
USP54-212ENST00000480210 KIAA1324LA8MWY0 1029 aaPredicted RBP6.84□□□□□ -1.31
USP54-212ENST00000480210 MCRIP1C9JLW8 97 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 M0R1W7 72 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 SULT1C2O00338 296 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 SLC33A1O00400 549 aaPredicted RBP6.84□□□□□ -1.31
USP54-212ENST00000480210 LDLRAD4O15165 306 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 TSC22D2O75157 780 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 OR7C1O76099 320 aaPredicted RBP6.84□□□□□ -1.31
USP54-212ENST00000480210 MPIG6BO95866 241 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 FGF2P09038 288 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 HNF1AP20823 631 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 GABRR1P24046 479 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 ZFP36P26651 326 aaKnown RBP6.84□□□□□ -1.31
USP54-212ENST00000480210 RPS19P39019 145 aaKnown RBP6.84□□□□□ -1.31
USP54-212ENST00000480210 AP3S2P59780 193 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 BPIFB3P59826 476 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 RAP2BP61225 183 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 LCN2P80188 198 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 QRFPP83859 136 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 PAX8Q06710 450 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 SCGB2A2Q13296 93 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 P2RY14Q15391 338 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 RNF212Q495C1 297 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 PAN3Q58A45 887 aaKnown RBP6.84□□□□□ -1.31
USP54-212ENST00000480210 SLC35E4Q6ICL7 350 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 C17orf107Q6ZR85 190 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 KIR3DL3Q8N743 410 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 FAM216BQ8N7L0 139 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 ZNF565Q8N9K5 539 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 OR51D1Q8NGF3 324 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 OR10K1Q8NGX5 313 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 OR56B4Q8NH76 319 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 CORO2AQ92828 525 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 FAM46BQ96A09 425 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 SOSTQ9BQB4 213 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 RIMS4Q9H426 269 aaPredicted RBP6.84□□□□□ -1.31
USP54-212ENST00000480210 HIF1ANQ9NWT6 349 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 OR6C3Q9NZP0 311 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 RCC2Q9P258 522 aaKnown RBP6.84□□□□□ -1.31
USP54-212ENST00000480210 RPUSD1Q9UJJ7 312 aaKnown RBP6.84□□□□□ -1.31
USP54-212ENST00000480210 HSF4Q9ULV5 492 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 SPATA2Q9UM82 520 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 UBE2J1Q9Y385 318 aaPredicted RBP6.84□□□□□ -1.31
USP54-212ENST00000480210 KPTNQ9Y664 436 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 F8P00451 2351 aa6.84□□□□□ -1.31
USP54-212ENST00000480210 ACANP16112 2415 aa6.84□□□□□ -1.32
USP54-212ENST00000480210 ZNF469Q96JG9 3925 aaPredicted RBP6.83□□□□□ -1.32
USP54-212ENST00000480210 FLNAP21333 2647 aaKnown RBP6.83□□□□□ -1.32
USP54-212ENST00000480210 A0A0A6YYJ9 748 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 TMEM272A0A1B0GTI8 110 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 HMSDA8MTL9 139 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 SIRPB1O00241 398 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 GEMIN2O14893 280 aaKnown RBP6.83□□□□□ -1.32
USP54-212ENST00000480210 PLA2G10O15496 165 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 PHF1O43189 567 aaPredicted RBP6.83□□□□□ -1.32
USP54-212ENST00000480210 PSPNO60542 156 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 PDCD6O75340 191 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 LY6G6DO95868 133 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 RBP4P02753 201 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 GZMHP20718 246 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 DUSP1P28562 367 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 MNDAP41218 407 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 OR10A3P58181 314 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 SEC61A1P61619 476 aaKnown RBP6.83□□□□□ -1.32
USP54-212ENST00000480210 RPL31P62899 125 aaKnown RBP6.83□□□□□ -1.32
USP54-212ENST00000480210 PAX2Q02962 417 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 MXD1Q05195 221 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 DYRK1AQ13627 763 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 PDCD1Q15116 288 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 TAF9Q16594 264 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 PIGYQ3MUY2 71 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 IDNKQ5T6J7 187 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 METTL11BQ5VVY1 283 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 PYHIN1Q6K0P9 492 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 TRAT1Q6PIZ9 186 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 Q6ZTK2 550 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 BATF2Q8N1L9 274 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 SVBPQ8N300 66 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 SUMF2Q8NBJ7 301 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 MAPK1IP1LQ8NDC0 245 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 TMEM104Q8NE00 496 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 H1FXQ92522 213 aaKnown RBP6.83□□□□□ -1.32
USP54-212ENST00000480210 MARC2Q969Z3 335 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 DPCDQ9BVM2 203 aaPredicted RBP6.83□□□□□ -1.32
USP54-212ENST00000480210 LPAR5Q9H1C0 372 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 OR51J1Q9H342 316 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 BANF2Q9H503 90 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 RNF167Q9H6Y7 350 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 HEXA-AS1Q9H8Q6 139 aa6.83□□□□□ -1.32
USP54-212ENST00000480210 GPN1Q9HCN4 374 aaPredicted RBP6.83□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms