RNA–Protein interactions for RNA: ENST00000479712.1

UPF3A-205, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2

Gene UPF3A, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-205ENST00000479712 FLG2Q5D862 2391 aaPredicted RBP3.73□□□□□ -1.81
UPF3A-205ENST00000479712 TMED7-TICAM2A0A0A6YYA0 188 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 A0A0G2JND7 137 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 LOC102725191A0A1B0GVB3 256 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 C5orf58C9J3I9 102 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 OR2T1O43869 369 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 ZNF780AO75290 641 aaPredicted RBP3.73□□□□□ -1.81
UPF3A-205ENST00000479712 GCM2O75603 506 aaPredicted RBP3.73□□□□□ -1.81
UPF3A-205ENST00000479712 TMEM50AO95807 157 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 CST1P01037 141 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 IGKV3-15P01624 115 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 KIR2DS4P43632 304 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 IDH2P48735 452 aaKnown RBP3.73□□□□□ -1.81
UPF3A-205ENST00000479712 PLP1P60201 277 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 CDK6Q00534 326 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 TRMT5Q32P41 509 aaKnown RBP3.73□□□□□ -1.81
UPF3A-205ENST00000479712 NDUFAF6Q330K2 333 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 PAGE3Q5JUK9 113 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 ERICH5Q6P6B1 374 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 C16orf87Q6PH81 154 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 ZNF836Q6ZNA1 936 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 Q6ZT83 130 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 ARPINQ7Z6K5 226 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 GABRG1Q8N1C3 465 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 C6orf223Q8N319 242 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 C11orf42Q8N5U0 333 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 OR8J3Q8NGG0 315 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 OR51S1Q8NGJ8 323 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 MFSD8Q8NHS3 518 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 RASSF5Q8WWW0 418 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 AURKBQ96GD4 344 aaPredicted RBP3.73□□□□□ -1.81
UPF3A-205ENST00000479712 ZNF317Q96PQ6 595 aaPredicted RBP3.73□□□□□ -1.81
UPF3A-205ENST00000479712 RNF167Q9H6Y7 350 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 TMEM185BQ9H7F4 350 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 CTPS2Q9NRF8 586 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 GLS2Q9UI32 602 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 ANGPT4Q9Y264 503 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 N6AMT1Q9Y5N5 214 aa3.73□□□□□ -1.81
UPF3A-205ENST00000479712 SOX21Q9Y651 276 aaPredicted RBP3.73□□□□□ -1.81
UPF3A-205ENST00000479712 UQCRHLA0A096LP55 91 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 A0A1B0GW55 424 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 TMEM72A0PK05 275 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 CLDN24A6NM45 220 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 FTCDNL1E5RQL4 147 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 H7C417 338 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 FXYD1O00168 92 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 NDUFAB1O14561 156 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 CCDC22O60826 627 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 CLPXO76031 633 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 OR7A10O76100 309 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 AHSA1O95433 338 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 IGF2P01344 180 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 C1QCP02747 245 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 CRYBA1P05813 215 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 MSMBP08118 114 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 DUX4L2P0CJ85 424 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 DUX4L3P0CJ86 424 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 DUX4L5P0CJ88 424 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 DUX4L6P0CJ89 424 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 DUX4L7P0CJ90 424 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 CXCR1P25024 350 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 TGFBR3Q03167 851 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 BSPH1Q075Z2 132 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 ARFRP1Q13795 201 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 STK11Q15831 433 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 C1orf100Q5SVJ3 147 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 RSBN1Q5VWQ0 802 aaPredicted RBP3.72□□□□□ -1.81
UPF3A-205ENST00000479712 FBXW9Q5XUX1 488 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 KRTAP5-1Q6L8H4 278 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 ZNF544Q6NX49 715 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 ULK3Q6PHR2 472 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 DUX4L9Q6RFH8 374 aaPredicted RBP3.72□□□□□ -1.81
UPF3A-205ENST00000479712 C19orf35Q6ZS72 473 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 OLIG3Q7RTU3 272 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 ABHD12BQ7Z5M8 362 aaPredicted RBP3.72□□□□□ -1.81
UPF3A-205ENST00000479712 CALHM3Q86XJ0 350 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 ERI1Q8IV48 349 aaKnown RBP3.72□□□□□ -1.81
UPF3A-205ENST00000479712 MUC15Q8N387 334 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 C17orf78Q8N4C9 275 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 LINC01006Q8NI28 216 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 C7orf33Q8WU49 177 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 ABHD3Q8WU67 409 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 SLC38A4Q969I6 547 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 APH1AQ96BI3 265 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 ARL5BQ96KC2 179 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 C18orf15Q96N68 181 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 TAPBPLQ9BX59 468 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 SLC19A3Q9BZV2 496 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 FAM192AQ9GZU8 254 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 C20orf85Q9H1P6 137 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 OR51J1Q9H342 316 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 PLGRKTQ9HBL7 147 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 SAR1AQ9NR31 198 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 FGFR1OP2Q9NVK5 253 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 GID8Q9NWU2 228 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 KCNIP1Q9NZI2 227 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 DUX4Q9UBX2 424 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 SMAD5-AS1Q9Y6J3 95 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 MYCBP2O75592 4640 aa3.72□□□□□ -1.81
UPF3A-205ENST00000479712 TRAV36DV7A0A075B6V5 113 aa3.71□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms