RNA–Protein interactions for RNA: ENST00000478913.1

CCDC171-207, Transcript of coiled-coil domain containing 171, humanhuman

TSL 3

Gene CCDC171, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-207ENST00000478913 CST1P01037 141 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 IGHV2-5P01817 119 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 MAGEA12P43365 314 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 ARFIP1P53367 373 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 TMEM33P57088 247 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 OR2B6P58173 313 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 TPI1P60174 286 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 LIPEQ05469 1076 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 PRKCDQ05655 676 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 GK3PQ14409 553 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 MAJINQ3KP22 176 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 ZNF404Q494X3 552 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 KLHL12Q53G59 568 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 AADACL4Q5VUY2 407 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 ZNF767PQ75MW2 155 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 CMC1Q7Z7K0 106 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 OFCC1Q8IZS5 231 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 SLC7A5P1Q8MH63 180 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 TCAIMQ8N3R3 496 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 OR51G1Q8NGK1 321 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 OR6Q1Q8NGQ2 317 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 OR6K3Q8NGY3 331 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 OR5K1Q8NHB7 308 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 RAB8BQ92930 207 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 EMG1Q92979 244 aaKnown RBP3.13□□□□□ -1.91
CCDC171-207ENST00000478913 CMTM7Q96FZ5 175 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 HSFY1Q96LI6 401 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 SLC29A1Q99808 456 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 UQCC2Q9BRT2 126 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 SNRNP25Q9BV90 132 aaKnown RBP3.13□□□□□ -1.91
CCDC171-207ENST00000478913 GON7Q9BXV9 100 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 C20orf27Q9GZN8 174 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 C6orf62Q9GZU0 229 aaPredicted RBP3.13□□□□□ -1.91
CCDC171-207ENST00000478913 SLC22A4Q9H015 551 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 DSN1Q9H410 356 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 RNF122Q9H9V4 155 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 CCDC59Q9P031 241 aaKnown RBP3.13□□□□□ -1.91
CCDC171-207ENST00000478913 CD300AQ9UGN4 299 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 CFL2Q9Y281 166 aa3.13□□□□□ -1.91
CCDC171-207ENST00000478913 RBMX2Q9Y388 322 aaKnown RBP3.13□□□□□ -1.91
CCDC171-207ENST00000478913 SORL1Q92673 2214 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 IGLV3-16A0A075B6K0 115 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 LOC100130705A0A1B0GUX0 176 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 A0A1W2PQ67 120 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 PRORSD1PA6NEY8 169 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 EFCAB10A6NFE3 127 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 CLDN24A6NM45 220 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 ATP6V1G2-DDX39BF2Z307 99 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 KRTAP4-16G5E9R7 235 aaPredicted RBP3.12□□□□□ -1.91
CCDC171-207ENST00000478913 H0YGG7 62 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 PRMT5O14744 637 aaPredicted RBP3.12□□□□□ -1.91
CCDC171-207ENST00000478913 AIREO43918 545 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 LYZL6O75951 148 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 GABARAPO95166 117 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 SNAP29O95721 258 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 S100A9P06702 114 aaKnown RBP3.12□□□□□ -1.91
CCDC171-207ENST00000478913 ADRA2AP08913 450 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 OR4A8P0C604 315 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 ZNF44P15621 663 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 PRKACBP22694 351 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 CRHBPP24387 322 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 ERP29P30040 261 aaKnown RBP3.12□□□□□ -1.91
CCDC171-207ENST00000478913 FMO3P31513 532 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 RPS5P46782 204 aaKnown RBP3.12□□□□□ -1.91
CCDC171-207ENST00000478913 HCAR3P49019 387 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 HNMTP50135 292 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 LHX2P50458 406 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 POLR2JP52435 117 aaKnown RBP3.12□□□□□ -1.91
CCDC171-207ENST00000478913 KRTAP10-8P60410 259 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 CXCR4P61073 352 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 AP1S1P61966 158 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 FADDQ13158 208 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 CDK10Q15131 360 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 QPRTQ15274 297 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 GUSBP1Q15486 140 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 IMPG1Q17R60 797 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 VPS26BQ4G0F5 336 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 ATP6AP1LQ52LC2 224 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 PDZK1Q5T2W1 519 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 CCNJQ5T5M9 372 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 GLYATQ6IB77 296 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 OPN5Q6U736 354 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 IDO2Q6ZQW0 420 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 FAM183BPQ6ZVS7 135 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 TMEM61Q8N0U2 210 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 ATPAF2Q8N5M1 289 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 PQLC3Q8N755 202 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 B3GNT7Q8NFL0 401 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 OR8J3Q8NGG0 315 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 OR6X1Q8NH79 312 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 ENKURQ8TC29 256 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 PIH1D2Q8WWB5 315 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 SLC38A4Q969I6 547 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 FCRL1Q96LA6 429 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 CLCC1Q96S66 551 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 TBL1YQ9BQ87 522 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 DCSTAMPQ9H295 470 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 RNF167Q9H6Y7 350 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 SIAEQ9HAT2 523 aa3.12□□□□□ -1.91
CCDC171-207ENST00000478913 POPDC3Q9HBV1 291 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 101.1 ms