RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 NCOR1P1Q9H4R4 102 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 FBLN5Q9UBX5 448 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 AK3Q9UIJ7 227 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 HILPDAQ9Y5L2 63 aa5.6□□□□□ -1.51
BRCA1-215ENST00000478531 PKD1L1Q8TDX9 2849 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 A0A1W2PPE3 182 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 C12orf77C9JDV5 145 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 H3BUX3 64 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 SDCBPO00560 298 aaPredicted RBP5.59□□□□□ -1.51
BRCA1-215ENST00000478531 LDLRAD4O15165 306 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 SPINT2O43291 252 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 CA11O75493 328 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 GLAP06280 429 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 RNASE1P07998 156 aaKnown RBP5.59□□□□□ -1.51
BRCA1-215ENST00000478531 GZMHP20718 246 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 CFPP27918 469 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 IER3P46695 156 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 SERPINB10P48595 397 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 VBP1P61758 197 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 NCS1P62166 190 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 FAM189A2Q15884 450 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 LY6EQ16553 131 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 LDLRAD2Q5SZI1 272 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 OLFML2AQ68BL7 652 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 GDPGP1Q6ZNW5 385 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 Q6ZTK2 550 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 C5orf24Q7Z6I8 188 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 LDLRAD3Q86YD5 345 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 DYNAPQ8N1N2 210 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 LILRB2Q8N423 598 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 BEND2Q8NDZ0 799 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 OR10V1Q8NGI7 309 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 OR4P4Q8NGL7 312 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 OR1L1Q8NH94 360 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 FAM216AQ8WUB2 273 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 RAB3CQ96E17 227 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 AJUBAQ96IF1 538 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 SSX3Q99909 188 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 PECRQ9BY49 303 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 NAA50Q9GZZ1 169 aaKnown RBP5.59□□□□□ -1.51
BRCA1-215ENST00000478531 ATG5Q9H1Y0 275 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 DPAGT1Q9H3H5 408 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 ZMAT3Q9HA38 289 aaKnown RBP5.59□□□□□ -1.51
BRCA1-215ENST00000478531 KCNIP1Q9NZI2 227 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 TBL2Q9Y4P3 447 aaKnown RBP5.59□□□□□ -1.51
BRCA1-215ENST00000478531 POMT1Q9Y6A1 747 aa5.59□□□□□ -1.51
BRCA1-215ENST00000478531 METTL21EPA6NDL7 271 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 NPIPB11E5RHQ5 1161 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 C15orf65H3BRN8 121 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 CLDN34H7C241 214 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 ORC5O43913 435 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 HBZP02008 142 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 CGB3P0DN86 165 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 CGB7P0DN87 165 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 GNB3P16520 340 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 RAB6AP20340 208 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 HTR1DP28221 377 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 PRRX1P54821 245 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 TMEM50BP56557 158 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 MRPS15P82914 257 aaKnown RBP5.58□□□□□ -1.52
BRCA1-215ENST00000478531 LRRC75BQ2VPJ9 315 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 PLAC9Q5JTB6 97 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 GPR107Q5VW38 600 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 FAM53AQ6NSI3 398 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-215ENST00000478531 TRAT1Q6PIZ9 186 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 GPR141Q7Z602 305 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 FAM89BQ8N5H3 189 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 OR10R2Q8NGX6 335 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 OR10X1Q8NGY0 326 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 ZNF596Q8TC21 504 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 ZFAND2BQ8WV99 257 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 IL1F10Q8WWZ1 152 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 PRDM13Q9H4Q3 707 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 TAF9BQ9HBM6 251 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 C12orf4Q9NQ89 552 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 GNG12Q9UBI6 72 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 VPREB3Q9UKI3 123 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 PSG11Q9UQ72 335 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 TRRAPQ9Y4A5 3859 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 VWFP04275 2813 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 FAM181BA6NEQ2 426 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 FOXI3A8MTJ6 420 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-215ENST00000478531 J3QR06 171 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 F2RL2O00254 374 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 CD34P28906 385 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 RPS19P39019 145 aaKnown RBP5.58□□□□□ -1.52
BRCA1-215ENST00000478531 RAB13P51153 203 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 GNMTQ14749 295 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 HLA-DRB5Q30154 266 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 MINOS1Q5TGZ0 78 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 MZT2BQ6NZ67 158 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 Q6ZPA2 131 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 SLC16A12Q6ZSM3 486 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 MOB1BQ7L9L4 216 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 GAPTQ8N292 157 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 TMEM86BQ8N661 226 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 OR5H6Q8NGV6 325 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 OR9G1Q8NH87 305 aa5.58□□□□□ -1.52
BRCA1-215ENST00000478531 GCDHQ92947 438 aaPredicted RBP5.58□□□□□ -1.52
BRCA1-215ENST00000478531 CMSS1Q9BQ75 279 aaKnown RBP5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms