RNA–Protein interactions for RNA: ENST00000478473.1

C9orf3-215, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 3

Gene C9orf3, Length 895 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-215ENST00000478473 GLT8D1Q68CQ7 371 aa18.66■□□□□ 0.58
C9orf3-215ENST00000478473 TRAT1Q6PIZ9 186 aa18.66■□□□□ 0.58
C9orf3-215ENST00000478473 PRSS48Q7RTY5 328 aa18.66■□□□□ 0.58
C9orf3-215ENST00000478473 ZNF439Q8NDP4 499 aa18.66■□□□□ 0.58
C9orf3-215ENST00000478473 ETAA1Q9NY74 926 aa18.66■□□□□ 0.58
C9orf3-215ENST00000478473 SDCBPO00560 298 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-215ENST00000478473 SLC22A1O15245 554 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 RGS10O43665 173 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 PDCD6O75340 191 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 GNG10P50151 68 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 MLLT11Q13015 90 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-215ENST00000478473 LTC4SQ16873 150 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 TMEM95Q3KNT9 176 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 HSD17B12Q53GQ0 312 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 C6orf183Q5T699 404 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 SYT6Q5T7P8 510 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-215ENST00000478473 STEAP3Q658P3 488 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 CEACAM19Q7Z692 300 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 DRAM1Q8N682 238 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 OR10X1Q8NGY0 326 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 OR56B4Q8NH76 319 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 FAM110DQ8TAY7 271 aaPredicted RBP18.65■□□□□ 0.58
C9orf3-215ENST00000478473 CCDC107Q8WV48 283 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 CAPSLQ8WWF8 208 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 UFD1Q92890 307 aa18.65■□□□□ 0.58
C9orf3-215ENST00000478473 FGF16O43320 207 aa18.64■□□□□ 0.57
C9orf3-215ENST00000478473 VSIG8P0DPA2 414 aa18.64■□□□□ 0.57
C9orf3-215ENST00000478473 PSMA1P25786 263 aaKnown RBP18.64■□□□□ 0.57
C9orf3-215ENST00000478473 QRFPP83859 136 aa18.64■□□□□ 0.57
C9orf3-215ENST00000478473 TRAM1Q15629 374 aa18.64■□□□□ 0.57
C9orf3-215ENST00000478473 ABCA11PQ4W5N1 156 aa18.64■□□□□ 0.57
C9orf3-215ENST00000478473 LIPKQ5VXJ0 399 aa18.64■□□□□ 0.57
C9orf3-215ENST00000478473 TMEM91Q6ZNR0 172 aa18.64■□□□□ 0.57
C9orf3-215ENST00000478473 CITED2Q99967 270 aaPredicted RBP18.64■□□□□ 0.57
C9orf3-215ENST00000478473 TM2D1Q9BX74 207 aa18.64■□□□□ 0.57
C9orf3-215ENST00000478473 TRAPPC2LQ9UL33 140 aa18.64■□□□□ 0.57
C9orf3-215ENST00000478473 MOB4Q9Y3A3 225 aa18.64■□□□□ 0.57
C9orf3-215ENST00000478473 HSD17B6O14756 317 aa18.63■□□□□ 0.57
C9orf3-215ENST00000478473 SPINT2O43291 252 aa18.63■□□□□ 0.57
C9orf3-215ENST00000478473 PEX14O75381 377 aa18.63■□□□□ 0.57
C9orf3-215ENST00000478473 GAPDHP04406 335 aaKnown RBP18.63■□□□□ 0.57
C9orf3-215ENST00000478473 SNRNP70P08621 437 aaKnown RBP18.63■□□□□ 0.57
C9orf3-215ENST00000478473 CPEP16870 476 aa18.63■□□□□ 0.57
C9orf3-215ENST00000478473 RPS27AP62979 156 aaKnown RBP18.63■□□□□ 0.57
C9orf3-215ENST00000478473 PDLIM3Q53GG5 364 aaPredicted RBP18.63■□□□□ 0.57
C9orf3-215ENST00000478473 RBM48Q5RL73 367 aaKnown RBP18.63■□□□□ 0.57
C9orf3-215ENST00000478473 SLC25A48Q6ZT89 311 aaKnown RBP18.63■□□□□ 0.57
C9orf3-215ENST00000478473 OR4K15Q8NH41 348 aa18.63■□□□□ 0.57
C9orf3-215ENST00000478473 IGHV1-3A0A0C4DH29 117 aa18.62■□□□□ 0.57
C9orf3-215ENST00000478473 TMEM14DPA8MWL7 114 aa18.62■□□□□ 0.57
C9orf3-215ENST00000478473 CCRL2O00421 344 aa18.62■□□□□ 0.57
C9orf3-215ENST00000478473 RCC1P18754 421 aaPredicted RBP18.62■□□□□ 0.57
C9orf3-215ENST00000478473 CHATP28329 748 aa18.62■□□□□ 0.57
C9orf3-215ENST00000478473 VHLP40337 213 aa18.62■□□□□ 0.57
C9orf3-215ENST00000478473 LY6G6FQ5SQ64 297 aa18.62■□□□□ 0.57
C9orf3-215ENST00000478473 HIST2H2BDQ6DRA6 164 aa18.62■□□□□ 0.57
C9orf3-215ENST00000478473 IZUMO2Q6UXV1 221 aa18.62■□□□□ 0.57
C9orf3-215ENST00000478473 IZUMO1Q8IYV9 350 aa18.62■□□□□ 0.57
C9orf3-215ENST00000478473 OR5AU1Q8NGC0 362 aa18.62■□□□□ 0.57
C9orf3-215ENST00000478473 KCNG3Q8TAE7 436 aa18.62■□□□□ 0.57
C9orf3-215ENST00000478473 A0A1W2PPE3 182 aa18.61■□□□□ 0.57
C9orf3-215ENST00000478473 HBZP02008 142 aa18.61■□□□□ 0.57
C9orf3-215ENST00000478473 LPLP06858 475 aa18.61■□□□□ 0.57
C9orf3-215ENST00000478473 HTR2CP28335 458 aa18.61■□□□□ 0.57
C9orf3-215ENST00000478473 UNC119Q13432 240 aa18.61■□□□□ 0.57
C9orf3-215ENST00000478473 ARSJQ5FYB0 599 aaPredicted RBP18.61■□□□□ 0.57
C9orf3-215ENST00000478473 TCTEX1D4Q5JR98 221 aa18.61■□□□□ 0.57
C9orf3-215ENST00000478473 Q8N6K4 173 aa18.61■□□□□ 0.57
C9orf3-215ENST00000478473 C5orf56Q8N8D9 126 aa18.61■□□□□ 0.57
C9orf3-215ENST00000478473 OR6M1Q8NGM8 313 aa18.61■□□□□ 0.57
C9orf3-215ENST00000478473 MRPL30Q8TCC3 161 aaKnown RBP18.61■□□□□ 0.57
C9orf3-215ENST00000478473 FAM46BQ96A09 425 aa18.61■□□□□ 0.57
C9orf3-215ENST00000478473 BPNT1O95861 308 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 MPIG6BO95866 241 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 ZNF134P52741 427 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 TBCEQ15813 527 aaPredicted RBP18.6■□□□□ 0.57
C9orf3-215ENST00000478473 CT45A1Q5HYN5 189 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 FAM53AQ6NSI3 398 aaPredicted RBP18.6■□□□□ 0.57
C9orf3-215ENST00000478473 OR4F17Q8NGA8 305 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 CT45A3Q8NHU0 189 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 UBALD1Q8TB05 177 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 RTN4IP1Q8WWV3 396 aaPredicted RBP18.6■□□□□ 0.57
C9orf3-215ENST00000478473 CYYR1Q96J86 154 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 OR4F4Q96R69 305 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 GFI1Q99684 422 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 MGLLQ99685 303 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 TMEM59Q9BXS4 323 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 TAF9BQ9HBM6 251 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 RAB26Q9ULW5 256 aa18.6■□□□□ 0.57
C9orf3-215ENST00000478473 TXNL1O43396 289 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 ARL6IP5O75915 188 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 IGKV1D-33P01593 117 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 IGKV1-33P01594 117 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 TMEM11P17152 192 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 IL3RAP26951 378 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 CD1BP29016 333 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 HTD2P86397 168 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 KPRPQ5T749 579 aaPredicted RBP18.59■□□□□ 0.57
C9orf3-215ENST00000478473 OR10K2Q6IF99 312 aa18.59■□□□□ 0.57
C9orf3-215ENST00000478473 CENPVQ7Z7K6 275 aaPredicted RBP18.59■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms