RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 IAH1Q2TAA2 248 aaPredicted RBP6.68□□□□□ -1.34
VMA21-203ENST00000477649 CR1LQ2VPA4 569 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 CLLU1Q5K131 121 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 PRAMEF6Q5VXH4 476 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 UNQ6494/PRO21346Q6UXR6 183 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 Q6ZPA2 131 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 WFDC8Q8IUA0 241 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 C1orf87Q8N0U7 546 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 ZNF561Q8N587 486 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 OR10V1Q8NGI7 309 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 LRRC20Q8TCA0 184 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 FAM222BQ8WU58 562 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 NINJ1Q92982 152 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 MSI2Q96DH6 328 aaKnown RBP6.68□□□□□ -1.34
VMA21-203ENST00000477649 SEC22AQ96IW7 307 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 C18orf12Q96KH6 178 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 AQP10Q96PS8 301 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 OR2V2Q96R30 315 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 GSX2Q9BZM3 304 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 DNTTIP1Q9H147 329 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 PRORYQ9H606 182 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 PLEKHA2Q9HB19 425 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 TAF9BQ9HBM6 251 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 OR6C3Q9NZP0 311 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 RNF7Q9UBF6 113 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 KIF25Q9UIL4 384 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 FZR1Q9UM11 496 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 UBE2J1Q9Y385 318 aaPredicted RBP6.68□□□□□ -1.34
VMA21-203ENST00000477649 GTF3C1Q12789 2109 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 LOC400499M0QZD8 3231 aa6.68□□□□□ -1.34
VMA21-203ENST00000477649 FREM2Q5SZK8 3169 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 IGKV1-6A0A0C4DH72 117 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 CLEC18AA5D8T8 446 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 LINC00862A6NCI5 91 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 CCSO14618 274 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 ABCD4O14678 606 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 ITGB1BP1O14713 200 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 PHF1O43189 567 aaPredicted RBP6.67□□□□□ -1.34
VMA21-203ENST00000477649 SPINT2O43291 252 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 HOXB5P09067 269 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 OR5AC1P0C628 307 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 MMP9P14780 707 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 RCC1P18754 421 aaPredicted RBP6.67□□□□□ -1.34
VMA21-203ENST00000477649 VDAC1P21796 283 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 F2RP25116 425 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 IL2RGP31785 369 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 HTR2BP41595 481 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 EFNB3Q15768 340 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 PHLDA2Q53GA4 152 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 KRBOX4Q5JUW0 171 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 NCMAPQ5T1S8 102 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 GGNBP1Q5YKI7 109 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 EIF5AL1Q6IS14 154 aaKnown RBP6.67□□□□□ -1.34
VMA21-203ENST00000477649 VHLLQ6RSH7 139 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 TBC1D26Q86UD7 250 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 ZNF695Q8IW36 515 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 BATF2Q8N1L9 274 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 FAM71E2Q8N5Q1 922 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 CLEC18CQ8NCF0 446 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 PLPPR1Q8TBJ4 325 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 SCARB1Q8WTV0 552 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 GLYATL2Q8WU03 294 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 SECTM1Q8WVN6 248 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 EDARADDQ8WWZ3 215 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 ZCCHC14Q8WYQ9 949 aaKnown RBP6.67□□□□□ -1.34
VMA21-203ENST00000477649 RBPMSQ93062 196 aaKnown RBP6.67□□□□□ -1.34
VMA21-203ENST00000477649 SDSLQ96GA7 329 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 ARPC5LQ9BPX5 153 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 MRPL37Q9BZE1 423 aaKnown RBP6.67□□□□□ -1.34
VMA21-203ENST00000477649 MS4A5Q9H3V2 200 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 PLEKHF2Q9H8W4 249 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 LIN7CQ9NUP9 197 aaKnown RBP6.67□□□□□ -1.34
VMA21-203ENST00000477649 UFSP2Q9NUQ7 469 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 MED9Q9NWA0 146 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 RDH8Q9NYR8 311 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 OR14J1Q9UGF5 321 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 URB1O60287 2271 aaKnown RBP6.67□□□□□ -1.34
VMA21-203ENST00000477649 APC2O95996 2303 aa6.67□□□□□ -1.34
VMA21-203ENST00000477649 INTS1Q8N201 2190 aaKnown RBP6.67□□□□□ -1.34
VMA21-203ENST00000477649 NBEAQ8NFP9 2946 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 ZFYVE26Q68DK2 2539 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 RNF222A6NCQ9 220 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 DPRXA6NFQ7 191 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 C17orf100A8MU93 164 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 E5RGE8 158 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 K7N7A8 449 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 ERVH48-1M5A8F1 160 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 CCL21O00585 134 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 ST8SIA3O43173 380 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 SPRY3O43610 288 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 PSPNO60542 156 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 ZNF737O75373 536 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 PGLYRP1O75594 196 aaPredicted RBP6.66□□□□□ -1.34
VMA21-203ENST00000477649 ADAP1O75689 374 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 FSTL3O95633 263 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 IGHV1-46P01743 117 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 THBDP07204 575 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 CD3EP07766 207 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 OR4A8P0C604 315 aa6.66□□□□□ -1.34
VMA21-203ENST00000477649 PSG2P11465 335 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms