RNA–Protein interactions for RNA: ENST00000477626.5

PRPF39-203, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 3,507 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-203ENST00000477626 C4orf46Q504U0 113 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 ZNF561Q8N587 486 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 OR4D5Q8NGN0 318 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 GON7Q9BXV9 100 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 FAM234AQ9H0X4 552 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 KAAG1Q9UBP8 84 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 C19orf84I3L1E1 186 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 UCP1P25874 307 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 ATXN7L3Q14CW9 347 aaPredicted RBP10.06□□□□□ -0.8
PRPF39-203ENST00000477626 DTX2Q86UW9 622 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 C11orf42Q8N5U0 333 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 OR2T35Q8NGX2 323 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 LINC01560Q8TB33 94 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 RRNAD1Q96FB5 475 aaKnown RBP10.06□□□□□ -0.8
PRPF39-203ENST00000477626 SNX22Q96L94 193 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 DNTTIP1Q9H147 329 aa10.06□□□□□ -0.8
PRPF39-203ENST00000477626 TEX13DA0A0J9YY54 714 aaPredicted RBP10.05□□□□□ -0.8
PRPF39-203ENST00000477626 GLIPR1P48060 266 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 PIGPP57054 158 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 SRSF1Q07955 248 aaKnown RBP eCLIP10.05□□□□□ -0.8
PRPF39-203ENST00000477626 ZNF585BQ52M93 769 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 PAN3Q58A45 887 aaKnown RBP10.05□□□□□ -0.8
PRPF39-203ENST00000477626 TMEM17Q86X19 198 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 TMEM222Q9H0R3 208 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 ITGB1BP1O14713 200 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 MPPED1O15442 326 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 ADAP1O75689 374 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 SLC22A5O76082 557 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 ZNF728P0DKX0 622 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 PPOXP50336 477 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 AESQ08117 197 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 SNTB1Q13884 538 aaKnown RBP10.05□□□□□ -0.8
PRPF39-203ENST00000477626 AARDQ4LEZ3 155 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 FAM201AQ5SY85 155 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 PHB2Q99623 299 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 GAB2Q9UQC2 676 aa10.05□□□□□ -0.8
PRPF39-203ENST00000477626 TRAV39A0A0B4J263 110 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 SIGLEC5O15389 551 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 SPRY3O43610 288 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 IFNA2P01563 188 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 IFNA6P05013 189 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 AKR1C4P17516 323 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 APOBEC3AP31941 199 aaPredicted RBP10.04□□□□□ -0.8
PRPF39-203ENST00000477626 ARPC4P59998 168 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 ZNF841Q6ZN19 808 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 FGFRL1Q8N441 504 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 SCGB3A2Q96PL1 93 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 ESRP2Q9H6T0 727 aaKnown RBP10.04□□□□□ -0.8
PRPF39-203ENST00000477626 CELSR1Q9NYQ6 3014 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 RPS10-NUDT3A0A1W2PQS6 291 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 TMEM30CPA0ZSE6 113 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 CCSO14618 274 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 PGLYRP1O75594 196 aaPredicted RBP10.04□□□□□ -0.8
PRPF39-203ENST00000477626 CYB5R3P00387 301 aaPredicted RBP10.04□□□□□ -0.8
PRPF39-203ENST00000477626 OR5AC1P0C628 307 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 SELLP14151 372 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 GNMTQ14749 295 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 LIAT1Q6ZQX7 453 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 FAM185AQ8N0U4 392 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 OR1L1Q8NH94 360 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 UFSP2Q9NUQ7 469 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 DUSP13Q9UII6 198 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 KIAA2026Q5HYC2 2103 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 OOEPA6NGQ2 149 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 MUC1P15941 1255 aaPredicted RBP10.04□□□□□ -0.8
PRPF39-203ENST00000477626 OR3A3P47888 321 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 ZNF134P52741 427 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 TNFAIP6P98066 277 aaPredicted RBP10.04□□□□□ -0.8
PRPF39-203ENST00000477626 TLE1Q04724 770 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 ZCCHC24Q8N2G6 241 aaKnown RBP10.04□□□□□ -0.8
PRPF39-203ENST00000477626 ZNF251Q9BRH9 671 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 TAF9BQ9HBM6 251 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 RNF7Q9UBF6 113 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 CTSZQ9UBR2 303 aa10.04□□□□□ -0.8
PRPF39-203ENST00000477626 TET2Q6N021 2002 aaPredicted RBP10.03□□□□□ -0.8
PRPF39-203ENST00000477626 IGHV3OR15-7A0A075B7D8 119 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 GNLYP22749 145 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 C11orf87Q6NUJ2 197 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 SELENOHQ8IZQ5 122 aaKnown RBP10.03□□□□□ -0.8
PRPF39-203ENST00000477626 DDB2Q92466 427 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 IL22RA2Q969J5 263 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 CYTL1Q9NRR1 136 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 KIF25Q9UIL4 384 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 H0Y980 276 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 CFDP00746 253 aaPredicted RBP10.03□□□□□ -0.8
PRPF39-203ENST00000477626 DNASE1P24855 282 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 CD80P33681 288 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 LIN54Q6MZP7 749 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 OR5D13Q8NGL4 314 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 FAM212BQ9NTI7 297 aaPredicted RBP10.03□□□□□ -0.8
PRPF39-203ENST00000477626 ERRFI1Q9UJM3 462 aaPredicted RBP10.03□□□□□ -0.8
PRPF39-203ENST00000477626 PCNX1Q96RV3 2341 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 P2RX3P56373 397 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 TBC1D26Q86UD7 250 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 ZNF843Q8N446 348 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 PPP1R1CQ8WVI7 109 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 RTN4IP1Q8WWV3 396 aaPredicted RBP10.03□□□□□ -0.8
PRPF39-203ENST00000477626 DCTN5Q9BTE1 182 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 SUCNR1Q9BXA5 334 aa10.03□□□□□ -0.8
PRPF39-203ENST00000477626 CCL28Q9NRJ3 127 aa10.03□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms