RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, human

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
PTCD3-212	ENST00000477520	MFSD12	Q6NUT3	480 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	SLC48A1	Q6P1K1	146 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	PLXDC2	Q6UX71	529 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	C1orf122	Q6ZSJ8	110 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	C16orf82	Q7Z2V1	217 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	LYPD6	Q86Y78	171 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	FAM89B	Q8N5H3	189 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR2C3	Q8N628	320 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	SIGLECL1	Q8N7X8	197 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	STPG4	Q8N801	248 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR10W1	Q8NGF6	305 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR10S1	Q8NGN2	331 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR6K6	Q8NGW6	343 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	OTOS	Q8NHW6	89 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	TMEM37	Q8WXS4	190 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	DYRK2	Q92630	601 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	ADIPOR1	Q96A54	375 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	TMEM186	Q96B77	213 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	STARD4	Q96DR4	205 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	SLC25A44	Q96H78	314 aa	Predicted RBP	4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	LINC00615	Q96LM1	132 aa	Predicted RBP	4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520		Q96M85	177 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	SLC46A1	Q96NT5	459 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	SIGLEC12	Q96PQ1	595 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR2V2	Q96R30	315 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	TNFRSF13C	Q96RJ3	184 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	ATP6V0B	Q99437	205 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	STRADB	Q9C0K7	418 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	LPAR5	Q9H1C0	372 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	PLSCR4	Q9NRQ2	329 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	SLC22A13	Q9Y226	551 aa		4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	ZBTB32	Q9Y2Y4	487 aa	Predicted RBP	4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520	LSM5	Q9Y4Y9	91 aa	Known RBP	4.05	□□□□□ -1.76
PTCD3-212	ENST00000477520		A0A0C4DFX4	3053 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	CCDC88C	Q9P219	2028 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	GAGE12B	A1L429	117 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	SERINC4	A6NH21	518 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	TMEM14DP	A8MWL7	114 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	DIRC3	C9JPN6	131 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520		J3KRW8	73 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	SMAD9	O15198	467 aa	Known RBP	4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	HYPM	O75409	117 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	MTX2	O75431	263 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	GJB3	O75712	270 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	NUDT14	O95848	222 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	DDAH2	O95865	285 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	CD160	O95971	181 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	HLA-DRB1	P01911	266 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	SERPINA7	P05543	415 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	HPN	P05981	417 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	CISD3	P0C7P0	127 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	PNMT	P11086	282 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	ERG	P11308	486 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	SLC25A6	P12236	298 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	HIST1H1D	P16402	221 aa	Known RBP	4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	CRISP2	P16562	243 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	AADAC	P22760	399 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	SSR2	P43308	183 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	CEBPD	P49716	269 aa	Predicted RBP	4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	PSMB3	P49720	205 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	COMP	P49747	757 aa	Predicted RBP	4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	CLDN15	P56746	228 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	RPL15	P61313	204 aa	Known RBP	4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	ERVS71-1	P61550	626 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	PPP1CB	P62140	327 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	RPS4X	P62701	263 aa	Known RBP	4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	CSNK2A1	P68400	391 aa	Predicted RBP	4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	EWSR1	Q01844	656 aa	Known RBP eCLIP	4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	TLE3	Q04726	772 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	ZFP36L1	Q07352	338 aa	Known RBP	4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	P2RY6	Q15077	328 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	CD226	Q15762	336 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	ADIRF	Q15847	76 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	TMEM249	Q2WGJ8	235 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	SPATA45	Q537H7	98 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	TMEM196	Q5HYL7	178 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	WDR38	Q5JTN6	314 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR4A47	Q6IF82	309 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	HIST2H2AB	Q8IUE6	130 aa	Predicted RBP	4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	MUC15	Q8N387	334 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	DEFB125	Q8N687	156 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	CDRT4	Q8N9R6	151 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	CSNK2A3	Q8NEV1	391 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520		Q8NFD4	153 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR5A1	Q8NGJ0	315 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR5D14	Q8NGL3	314 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	OR1K1	Q8NGR3	316 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	PFN4	Q8NHR9	129 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	ZNF596	Q8TC21	504 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	SCGB1C1	Q8TD33	95 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	ERGIC1	Q969X5	290 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	SLC35A4	Q96G79	324 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	C18orf12	Q96KH6	178 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	C16orf92	Q96LL3	132 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	TSPAN32	Q96QS1	320 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	SDF2	Q99470	211 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	SIGMAR1	Q99720	223 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	ATP5S	Q99766	215 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	SMIM7	Q9BQ49	75 aa		4.04	□□□□□ -1.76
PTCD3-212	ENST00000477520	RAB11FIP5	Q9BXF6	653 aa		4.04	□□□□□ -1.76

Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms