RNA–Protein interactions for RNA: ENST00000477288.5

VARS2-209, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 2

Gene VARS2, Length 6,054 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-209ENST00000477288 CLPPQ16740 277 aaPredicted RBP16.25■□□□□ 0.19
VARS2-209ENST00000477288 PIPOXQ9P0Z9 390 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 DLK1P80370 383 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 FGF11Q92914 225 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 TMEM38BQ9NVV0 291 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 HSPB8Q9UJY1 196 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 SCAND1P57086 179 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 ZNF502Q8TBZ5 544 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 FUT9Q9Y231 359 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 ZNF273Q14593 569 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 COLQQ9Y215 455 aaPredicted RBP16.25■□□□□ 0.19
VARS2-209ENST00000477288 ADRA2AP08913 450 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 ADAMTS17Q8TE56 1095 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 OR51B2Q9Y5P1 312 aa16.25■□□□□ 0.19
VARS2-209ENST00000477288 COL10A1Q03692 680 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 CCDC144NLQ6NUI1 221 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 OPN3Q9H1Y3 402 aaPredicted RBP16.24■□□□□ 0.19
VARS2-209ENST00000477288 TMEM210A6NLX4 147 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 CCL8P80075 99 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 SNX22Q96L94 193 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 PARP11Q9NR21 331 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 FRRS1LQ9P0K9 344 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 HILPDAQ9Y5L2 63 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 MRPS18BQ9Y676 258 aaKnown RBP16.24■□□□□ 0.19
VARS2-209ENST00000477288 PPYP01298 95 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 SCGB1A1P11684 91 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 MRPL24Q96A35 216 aaKnown RBP16.24■□□□□ 0.19
VARS2-209ENST00000477288 SLC25A33Q9BSK2 321 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 SMCHD1A6NHR9 2005 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 ISXQ2M1V0 245 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 OIT3Q8WWZ8 545 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 HIGD1AQ9Y241 93 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 GFRA1P56159 465 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 CD300LDQ6UXZ3 194 aa16.24■□□□□ 0.19
VARS2-209ENST00000477288 SYNGR1O43759 233 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 PSG2P11465 335 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 VAX2Q9UIW0 290 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 CGB1A6NKQ9 187 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 VDAC1P21796 283 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 AMMECR1LQ6DCA0 310 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 SLC35E3Q7Z769 313 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 OR5AU1Q8NGC0 362 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 KNTC1P50748 2209 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 NKX2-6A6NCS4 301 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 TMPRSS3P57727 454 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 EBLN2Q6P2I7 272 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 SNURFLB1AK76 121 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 RPL31P62899 125 aaKnown RBP16.23■□□□□ 0.19
VARS2-209ENST00000477288 PNRC1Q12796 327 aaPredicted RBP16.23■□□□□ 0.19
VARS2-209ENST00000477288 XAF1Q6GPH4 301 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 OR1L8Q8NGR8 309 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 WDFY2Q96P53 400 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 NMUP48645 174 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 BPIFA4PQ86YQ2 179 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 RAB37Q96AX2 223 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 C10orf35Q96D05 121 aa16.23■□□□□ 0.19
VARS2-209ENST00000477288 FTH1P19P0C7X4 201 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 ABHD1Q96SE0 405 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 WDR54Q9H977 334 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 RNF122Q9H9V4 155 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 IGKV3D-11A0A0A0MRZ8 115 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 A6NDN8 102 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 IFITM10A6NMD0 228 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 IGKV3-11P04433 115 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 J3QR06 171 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 ISLRO14498 428 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 CXorf1O96002 111 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 ATG101Q9BSB4 218 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 HSF4Q9ULV5 492 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 FAM181BA6NEQ2 426 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 DHRS7CA6NNS2 312 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 TEPPQ6URK8 271 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 C9orf40Q8IXQ3 194 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 EWSR1Q01844 656 aaKnown RBP eCLIP16.22■□□□□ 0.19
VARS2-209ENST00000477288 LGALSLQ3ZCW2 172 aaPredicted RBP16.22■□□□□ 0.19
VARS2-209ENST00000477288 ADAD2Q8NCV1 583 aaKnown RBP16.22■□□□□ 0.19
VARS2-209ENST00000477288 ANGPTL4Q9BY76 406 aa16.22■□□□□ 0.19
VARS2-209ENST00000477288 PACRGQ96M98 296 aaPredicted RBP16.21■□□□□ 0.19
VARS2-209ENST00000477288 RSG1Q9BU20 258 aa16.21■□□□□ 0.19
VARS2-209ENST00000477288 BTF3P20290 206 aaKnown RBP16.21■□□□□ 0.19
VARS2-209ENST00000477288 FOXL2P58012 376 aa16.21■□□□□ 0.19
VARS2-209ENST00000477288 MGAT2Q10469 447 aa16.21■□□□□ 0.19
VARS2-209ENST00000477288 HAX1O00165 279 aa16.21■□□□□ 0.19
VARS2-209ENST00000477288 PDE6DO43924 150 aa16.21■□□□□ 0.19
VARS2-209ENST00000477288 ERVFRD-1P60508 538 aa16.21■□□□□ 0.19
VARS2-209ENST00000477288 LRRC75BQ2VPJ9 315 aa16.21■□□□□ 0.19
VARS2-209ENST00000477288 LYZL2Q7Z4W2 148 aa16.21■□□□□ 0.19
VARS2-209ENST00000477288 RGP1Q92546 391 aaPredicted RBP16.21■□□□□ 0.19
VARS2-209ENST00000477288 RTN4RQ9BZR6 473 aa16.21■□□□□ 0.19
VARS2-209ENST00000477288 RCC2Q9P258 522 aaKnown RBP16.21■□□□□ 0.19
VARS2-209ENST00000477288 WIPI2Q9Y4P8 454 aa16.21■□□□□ 0.19
VARS2-209ENST00000477288 FFAR1O14842 300 aa16.21■□□□□ 0.18
VARS2-209ENST00000477288 SSX8Q7RTT4 187 aa16.21■□□□□ 0.18
VARS2-209ENST00000477288 TP53RKQ96S44 253 aa16.21■□□□□ 0.18
VARS2-209ENST00000477288 C16orf92Q96LL3 132 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 ZNF488Q96MN9 340 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 OR2W1Q9Y3N9 320 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 UBR3Q6ZT12 1888 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 FADS6Q8N9I5 356 aa16.2■□□□□ 0.18
VARS2-209ENST00000477288 CCL13Q99616 98 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms