RNA–Protein interactions for RNA: ENST00000477069.5

NUP188-205, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 2,941 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-205ENST00000477069 SPIN2BQ9BPZ2 258 aa9.69□□□□□ -0.86
NUP188-205ENST00000477069 GINS3Q9BRX5 216 aa9.69□□□□□ -0.86
NUP188-205ENST00000477069 COQ3Q9NZJ6 369 aa9.69□□□□□ -0.86
NUP188-205ENST00000477069 GLS2Q9UI32 602 aa9.69□□□□□ -0.86
NUP188-205ENST00000477069 FZR1Q9UM11 496 aa9.69□□□□□ -0.86
NUP188-205ENST00000477069 SIGLEC5O15389 551 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 TIMM8AO60220 97 aaPredicted RBP9.68□□□□□ -0.86
NUP188-205ENST00000477069 ADCYAP1P18509 176 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 SRSF3P84103 164 aaKnown RBP9.68□□□□□ -0.86
NUP188-205ENST00000477069 ID3Q02535 119 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 MSMPQ1L6U9 139 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 ZNF718Q3SXZ3 478 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 PXDC1Q5TGL8 231 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 PRAMEF6Q5VXH4 476 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 ATRAIDQ6UW56 229 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 ODF3L1Q8IXM7 274 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 LYPD6BQ8NI32 183 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 FAM122AQ96E09 287 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 TRAPPC2LQ9UL33 140 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 PITX3O75364 302 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 NKX2-1P43699 371 aaPredicted RBP9.68□□□□□ -0.86
NUP188-205ENST00000477069 EWSR1Q01844 656 aaKnown RBP eCLIP9.68□□□□□ -0.86
NUP188-205ENST00000477069 GTF3C1Q12789 2109 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 EIF2S3LQ2VIR3 472 aaKnown RBP9.68□□□□□ -0.86
NUP188-205ENST00000477069 C10orf91Q5T1B1 145 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 C1orf185Q5T7R7 199 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 BTNL8Q6UX41 500 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 IL1F10Q8WWZ1 152 aa9.68□□□□□ -0.86
NUP188-205ENST00000477069 PARP12Q9H0J9 701 aaKnown RBP9.68□□□□□ -0.86
NUP188-205ENST00000477069 A0A0G2JRQ6 117 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 TMEM218A2RU14 115 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 ABCD4O14678 606 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 KLK10O43240 276 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 TIMP3P35625 211 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 FABP6P51161 128 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 POLR2GP62487 172 aaKnown RBP eCLIP9.67□□□□□ -0.86
NUP188-205ENST00000477069 NHLH2Q02577 135 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 PJVKQ0ZLH3 352 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 C3orf36Q3SXR2 165 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 CXorf66Q5JRM2 361 aaPredicted RBP9.67□□□□□ -0.86
NUP188-205ENST00000477069 SLC35E4Q6ICL7 350 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 FIP1L1Q6UN15 594 aaKnown RBP9.67□□□□□ -0.86
NUP188-205ENST00000477069 AKR1E2Q96JD6 320 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 TOLLIPQ9H0E2 274 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 MSL2Q9HCI7 577 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 PARP11Q9NR21 331 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 SSUH2Q9Y2M2 353 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 IGSF23A1L1A6 192 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 PTBP3O95758 552 aaKnown RBP9.67□□□□□ -0.86
NUP188-205ENST00000477069 IGKV1-39P01597 117 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 IGKV1D-39P04432 117 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 SPP1P10451 314 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 SLC25A6P12236 298 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 TIMM23BQ5SRD1 257 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 OR2C3Q8N628 320 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 COQ2Q96H96 371 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 LYRM2Q9NU23 88 aaPredicted RBP9.67□□□□□ -0.86
NUP188-205ENST00000477069 OR14J1Q9UGF5 321 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 RNF115Q9Y4L5 304 aa9.67□□□□□ -0.86
NUP188-205ENST00000477069 TMEM30CPA0ZSE6 113 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 KIAA1324LA8MWY0 1029 aaPredicted RBP9.66□□□□□ -0.86
NUP188-205ENST00000477069 MED6O75586 246 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 TMEM50AO95807 157 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 APOC3P02656 99 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 SEC11BP0C7V7 166 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 PSG2P11465 335 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 MMP9P14780 707 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 GNMTQ14749 295 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 S100PBPQ96BU1 408 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 PROB1E7EW31 1015 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 FBXO24O75426 580 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 CRYABP02511 175 aaKnown RBP9.66□□□□□ -0.86
NUP188-205ENST00000477069 GCH1P30793 250 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 CEACAM8P31997 349 aaPredicted RBP9.66□□□□□ -0.86
NUP188-205ENST00000477069 OR3A1P47881 315 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 PAX5Q02548 391 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 PRR18Q8N4B5 295 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 ZMAT5Q9UDW3 170 aaKnown RBP9.66□□□□□ -0.86
NUP188-205ENST00000477069 FAM24AA6NFZ4 105 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 C12orf77C9JDV5 145 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 IFNL4K9M1U5 179 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 S100GP29377 79 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 CD200P41217 278 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 AKR1C2P52895 323 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 AKR1C1Q04828 323 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 BTN1A1Q13410 526 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 EIF4EBP1Q13541 118 aaPredicted RBP9.66□□□□□ -0.86
NUP188-205ENST00000477069 ZNF295-AS1Q8N0V1 137 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 OR51H1Q8NH63 302 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 UBALD1Q8TB05 177 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 GPR146Q96CH1 333 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 LRRC46Q96FV0 321 aa9.66□□□□□ -0.86
NUP188-205ENST00000477069 BORCS7-ASMTA0A0B4J1R7 106 aa9.65□□□□□ -0.86
NUP188-205ENST00000477069 SSSCA1O60232 199 aa9.65□□□□□ -0.86
NUP188-205ENST00000477069 TFF1P04155 84 aa9.65□□□□□ -0.86
NUP188-205ENST00000477069 CAV2P51636 162 aa9.65□□□□□ -0.86
NUP188-205ENST00000477069 PAX9P55771 341 aa9.65□□□□□ -0.86
NUP188-205ENST00000477069 NKX6-1P78426 367 aaPredicted RBP9.65□□□□□ -0.86
NUP188-205ENST00000477069 ZNF585BQ52M93 769 aa9.65□□□□□ -0.86
NUP188-205ENST00000477069 FAM57AQ8TBR7 257 aa9.65□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms