RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 PRRX2Q99811 253 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 MRPL37Q9BZE1 423 aaKnown RBP13.62□□□□□ -0.23
VARS2-207ENST00000476162 CLCF1Q9UBD9 225 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 HS3ST1O14792 307 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 LYZL6O75951 148 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 MBPP02686 304 aaPredicted RBP13.62□□□□□ -0.23
VARS2-207ENST00000476162 TK1P04183 234 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 CEACAM6P40199 344 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 LPAR6P43657 344 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 NOVA1P51513 510 aaKnown RBP13.62□□□□□ -0.23
VARS2-207ENST00000476162 KIAA0141Q14154 515 aaPredicted RBP13.62□□□□□ -0.23
VARS2-207ENST00000476162 HERPUD1Q15011 391 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 RPL7L1Q6DKI1 246 aaKnown RBP13.62□□□□□ -0.23
VARS2-207ENST00000476162 BTNL8Q6UX41 500 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 LGI3Q8N145 548 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 SUMF2Q8NBJ7 301 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 UBAC2Q8NBM4 344 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 OR51I2Q9H344 312 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 PLK3Q9H4B4 646 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 POMT1Q9Y6A1 747 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 ZFHX4Q86UP3 3567 aa13.62□□□□□ -0.23
VARS2-207ENST00000476162 CFAP47Q6ZTR5 3102 aa13.61□□□□□ -0.23
VARS2-207ENST00000476162 H7C1Q1 480 aa13.61□□□□□ -0.23
VARS2-207ENST00000476162 MPPED1O15442 326 aa13.61□□□□□ -0.23
VARS2-207ENST00000476162 DIRAS3O95661 229 aa13.61□□□□□ -0.23
VARS2-207ENST00000476162 IDH3GP51553 393 aaPredicted RBP13.61□□□□□ -0.23
VARS2-207ENST00000476162 UBE2NP61088 152 aaKnown RBP13.61□□□□□ -0.23
VARS2-207ENST00000476162 TGFBR3Q03167 851 aa13.61□□□□□ -0.23
VARS2-207ENST00000476162 IL24Q13007 206 aa13.61□□□□□ -0.23
VARS2-207ENST00000476162 FAM58AQ8N1B3 248 aa13.61□□□□□ -0.23
VARS2-207ENST00000476162 SECTM1Q8WVN6 248 aa13.61□□□□□ -0.23
VARS2-207ENST00000476162 RDH5Q92781 318 aa13.61□□□□□ -0.23
VARS2-207ENST00000476162 TSTD3H0UI37 97 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 TAAR5O14804 337 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 CD81P60033 236 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 NUTF2P61970 127 aaKnown RBP13.6□□□□□ -0.23
VARS2-207ENST00000476162 C20orf204Q6ZNR8 217 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 FAM214BQ7L5A3 538 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 OR10D4PQ8NGN7 298 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 OR2J1Q9GZK6 312 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 GLRX2Q9NS18 164 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 ATP23Q9Y6H3 246 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 CNOT1A5YKK6 2376 aaKnown RBP13.6□□□□□ -0.23
VARS2-207ENST00000476162 TRAV24A0A0B4J272 114 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 IGKV1-6A0A0C4DH72 117 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 C3orf85A0A1B0GTC6 90 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 TRDCB7Z8K6 153 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 SMPD2O60906 423 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 ARG1P05089 322 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 ERVS71-1P61550 626 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 IGFL2Q6UWQ7 119 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 CLEC9AQ6UXN8 241 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 FBXW12Q6X9E4 464 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 MEX3BQ6ZN04 569 aaKnown RBP13.6□□□□□ -0.23
VARS2-207ENST00000476162 OR52M1Q8NGK5 317 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 PRO1933Q9H354 126 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 TAF9BQ9HBM6 251 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 SPACA1Q9HBV2 294 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 WASF3Q9UPY6 502 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 AMDHD2Q9Y303 409 aa13.6□□□□□ -0.23
VARS2-207ENST00000476162 KIR2DS1A0A191URI9 304 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 AGPAT2O15120 278 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 KIR2DS4P43632 304 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 SULT1A1P50225 295 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 NDUFA6P56556 154 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 PPP1CBP62140 327 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 MRPL49Q13405 166 aaKnown RBP13.59□□□□□ -0.23
VARS2-207ENST00000476162 KIR2DS1Q14954 304 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 SPIN3Q5JUX0 258 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 LINC00596Q86U02 117 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 SLC35G3Q8N808 338 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 CNEP1R1Q8N9A8 125 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 MRPL30Q8TCC3 161 aaKnown RBP13.59□□□□□ -0.23
VARS2-207ENST00000476162 PKIBQ9C010 78 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 CDH20Q9HBT6 801 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 DOK5Q9P104 306 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 FBXL17Q9UF56 701 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 DMXL1Q9Y485 3027 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 ESPL1Q14674 2120 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 IGKV1D-13A0A0B4J2D9 117 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 IGKV1-13P0DP09 117 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 PCP4P48539 62 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 TMEM33P57088 247 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 TMEM268Q5VZI3 342 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 ZNF818PQ6ZRF7 136 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 WDR86Q86TI4 376 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 TBC1D26Q86UD7 250 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 YPEL4Q96NS1 127 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 GPHA2Q96T91 129 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 SMIM3Q9BZL3 60 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 ZDHHC8Q9ULC8 765 aa13.59□□□□□ -0.23
VARS2-207ENST00000476162 J3QT63 122 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 EIF5AP63241 154 aaKnown RBP13.58□□□□□ -0.24
VARS2-207ENST00000476162 IL13RA2Q14627 380 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 GABRA6Q16445 453 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 ALKBH6Q3KRA9 238 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 HEPN1Q6WQI6 88 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 FAM185AQ8N0U4 392 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 GAPTQ8N292 157 aa13.58□□□□□ -0.24
VARS2-207ENST00000476162 RIMS4Q9H426 269 aaPredicted RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 58.2 ms