RNA–Protein interactions for RNA: ENST00000475558.5

SHQ1-207, Transcript of SHQ1, H/ACA ribonucleoprotein assembly factor, humanhuman

TSL 5

Gene SHQ1, Length 666 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHQ1-207ENST00000475558 ARSJQ5FYB0 599 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-207ENST00000475558 KRBOX4Q5JUW0 171 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 LY6G6FQ5SQ64 297 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 METTL11BQ5VVY1 283 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 CD276Q5ZPR3 534 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 C11orf71Q6IPW1 123 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 ZNF788Q6ZQV5 615 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 NLRC3Q7RTR2 1065 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 FAM185AQ8N0U4 392 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 SPICQ8N5J4 248 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 NUDCD2Q8WVJ2 157 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 ZNF486Q96H40 463 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-207ENST00000475558 NKX3-1Q99801 234 aaPredicted RBP5.86□□□□□ -1.47
SHQ1-207ENST00000475558 TOLLIPQ9H0E2 274 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 KCNK15Q9H427 330 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 MBNL3Q9NUK0 354 aaKnown RBP5.86□□□□□ -1.47
SHQ1-207ENST00000475558 TAS2R3Q9NYW6 316 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 OR14J1Q9UGF5 321 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 LAMP3Q9UQV4 416 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 CR1P17927 2039 aa5.86□□□□□ -1.47
SHQ1-207ENST00000475558 PRR14LQ5THK1 2151 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 TRGV10A0A0A0MS01 117 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 TRBV23-1A0A0A0MS06 115 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 A8MV72 311 aaPredicted RBP5.85□□□□□ -1.47
SHQ1-207ENST00000475558 NPIPB11E5RHQ5 1161 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 OVOL3O00110 214 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 SIRPB1O00241 398 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 ITGB1BP1O14713 200 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 TNFRSF13BO14836 293 aaPredicted RBP5.85□□□□□ -1.47
SHQ1-207ENST00000475558 FABP7O15540 132 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 ZNF737O75373 536 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 CD8AP01732 235 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 LIPFP07098 398 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 FAM157CP0CG43 387 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 TRAPPC2P0DI81 140 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 TRAPPC2BP0DI82 140 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 DAOP14920 347 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 DUSP1P28562 367 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 IL2RGP31785 369 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 HRH1P35367 487 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 MSMO1Q15800 293 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 RSBN1Q5VWQ0 802 aaPredicted RBP5.85□□□□□ -1.47
SHQ1-207ENST00000475558 STUMQ69YW2 141 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 SFRP4Q6FHJ7 346 aaPredicted RBP5.85□□□□□ -1.47
SHQ1-207ENST00000475558 IDO2Q6ZQW0 420 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 CMTM1Q8IZ96 169 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 CD177Q8N6Q3 437 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 ASCC1Q8N9N2 400 aaKnown RBP5.85□□□□□ -1.47
SHQ1-207ENST00000475558 BOLLQ8N9W6 283 aaKnown RBP5.85□□□□□ -1.47
SHQ1-207ENST00000475558 ZBTB34Q8NCN2 500 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 MAPK1IP1LQ8NDC0 245 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 TMEM185AQ8NFB2 350 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 OR51S1Q8NGJ8 323 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 OR52M1Q8NGK5 317 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 OR4C16Q8NGL9 310 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 OR10J5Q8NHC4 309 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 MRPL30Q8TCC3 161 aaKnown RBP5.85□□□□□ -1.47
SHQ1-207ENST00000475558 ASB13Q8WXK3 278 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 NEUROG1Q92886 237 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 AKR1E2Q96JD6 320 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 ZNF488Q96MN9 340 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 SHARPINQ9H0F6 387 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 WDR13Q9H1Z4 485 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 EHFQ9NZC4 300 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 ZNF222Q9UK12 451 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 CDC42EP3Q9UKI2 254 aa5.85□□□□□ -1.47
SHQ1-207ENST00000475558 UBE2J1Q9Y385 318 aaPredicted RBP5.85□□□□□ -1.47
SHQ1-207ENST00000475558 IGKV1D-17A0A075B6S4 117 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 MEIKINA0A087WXM9 373 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 FAM172BPA6NC97 362 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP5.84□□□□□ -1.47
SHQ1-207ENST00000475558 WNT9BO14905 357 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 HSPA12AO43301 675 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 CYB5R3P00387 301 aaPredicted RBP5.84□□□□□ -1.47
SHQ1-207ENST00000475558 PMP2P02689 132 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 HPXP02790 462 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 SOD3P08294 240 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 ZNF735P0CB33 412 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 PTHLHP12272 177 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 ANXA3P12429 323 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 COL8A2P25067 703 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 FPR2P25090 351 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 PDLIM4P50479 330 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 P2RX3P56373 397 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 HERV-K104P61576 105 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 MADCAM1Q13477 382 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 TMEM128Q5BJH2 165 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 RNASE12Q5GAN4 147 aaKnown RBP5.84□□□□□ -1.47
SHQ1-207ENST00000475558 OR52W1Q6IF63 320 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 C17orf107Q6ZR85 190 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 KCTD9Q7L273 389 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 SLC38A6Q8IZM9 456 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 GVQW1Q8N7I0 195 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 TCTEX1D1Q8N7M0 179 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 CCDC71LQ8N9Z2 235 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 CHAC2Q8WUX2 184 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 KIRREL1Q96J84 757 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 GINS4Q9BRT9 223 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 GAL3ST2Q9H3Q3 398 aa5.84□□□□□ -1.47
SHQ1-207ENST00000475558 LINC00574Q9H8X3 128 aa5.84□□□□□ -1.47
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms