RNA–Protein interactions for RNA: ENST00000474956.1

RNF220-211, Transcript of ring finger protein 220, humanhuman

TSL 2

Gene RNF220, Length 3,303 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220-211ENST00000474956 MDP1Q86V88 176 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 PARPBPQ9NWS1 579 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 KIAA1456Q9P272 454 aa10.62□□□□□ -0.71
RNF220-211ENST00000474956 A0A087WWC5 75 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 TRBV23-1A0A0A0MS06 115 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 ZNF729A6NN14 1252 aaPredicted RBP10.61□□□□□ -0.71
RNF220-211ENST00000474956 H3BQ15 152 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 HSPA12AO43301 675 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 PITX3O75364 302 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 LYZL6O75951 148 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 C20orf204Q6ZNR8 217 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 KLF13Q9Y2Y9 288 aaPredicted RBP10.61□□□□□ -0.71
RNF220-211ENST00000474956 TRGV5A0A0B4J1U4 118 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 FAM24AA6NFZ4 105 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 YIF1AO95070 293 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 S100A2P29034 98 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 ASCL1P50553 236 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 SPSB3Q6PJ21 355 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 MEX3BQ6ZN04 569 aaKnown RBP10.61□□□□□ -0.71
RNF220-211ENST00000474956 LINC00470Q9BZP3 86 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 C11orf1Q9H5F2 150 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 ZZEF1O43149 2961 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 KLRC4-KLRK1H3BQV0 150 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 SLC33A1O00400 549 aaPredicted RBP10.61□□□□□ -0.71
RNF220-211ENST00000474956 SCTP09683 121 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 CA6P23280 308 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 TAGLN2P37802 199 aaKnown RBP10.61□□□□□ -0.71
RNF220-211ENST00000474956 NKX2-1P43699 371 aaPredicted RBP10.61□□□□□ -0.71
RNF220-211ENST00000474956 CCL20P78556 96 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 OR2B11Q5JQS5 317 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 RAB39BQ96DA2 213 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 FER1L6-AS2Q96M78 137 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 TP53RKQ96S44 253 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 SLC25A31Q9H0C2 315 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 PLEKHF2Q9H8W4 249 aa10.61□□□□□ -0.71
RNF220-211ENST00000474956 CD46P15529 392 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 AADACP22760 399 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 UBE2KP61086 200 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 RND3P61587 244 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 SPIN2AQ99865 258 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 SPIN2BQ9BPZ2 258 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 GAR1Q9NY12 217 aaKnown RBP10.6□□□□□ -0.71
RNF220-211ENST00000474956 TREM2Q9NZC2 230 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 MMP24Q9Y5R2 645 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 HEATR1Q9H583 2144 aaKnown RBP10.6□□□□□ -0.71
RNF220-211ENST00000474956 C3orf85A0A1B0GTC6 90 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 SLC22A20A6NK97 555 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 CD300LBA8K4G0 201 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 TRDCB7Z8K6 153 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 RPL36A-HNRNPH2H7BZ11 118 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 HS3ST1O14792 307 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 PDCD6O75340 191 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 TFF1P04155 84 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 SRP19P09132 144 aaKnown RBP10.6□□□□□ -0.71
RNF220-211ENST00000474956 FAM185AQ8N0U4 392 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 DOK5Q9P104 306 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 ACACAQ13085 2346 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 PCNX1Q96RV3 2341 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 ROS1P08922 2347 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 IGSF23A1L1A6 192 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 NKX2-6A6NCS4 301 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 CDRT15L2A8MXV6 281 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 HSD17B6O14756 317 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 MPPED1O15442 326 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 SLC34A2O95436 690 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 TNFSF10P50591 281 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 NDUFA6P56556 154 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 MALLQ13021 153 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 EXTL1Q92935 676 aa10.6□□□□□ -0.71
RNF220-211ENST00000474956 CUL9Q8IWT3 2517 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 CXorf65A6NEN9 183 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 ZNF727A8MUV8 499 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 HERPUD1Q15011 391 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 ELOBQ15370 118 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 PYY3Q5JQD4 70 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 TMEM211Q6ICI0 200 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 ZNF600Q6ZNG1 722 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 ZNF610Q8N9Z0 462 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 RDH5Q92781 318 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 GNPNAT1Q96EK6 184 aaPredicted RBP10.59□□□□□ -0.71
RNF220-211ENST00000474956 ABHD14BQ96IU4 210 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 ABHD14AQ9BUJ0 271 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 TMEM222Q9H0R3 208 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 OPA3Q9H6K4 179 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 SIRT7Q9NRC8 400 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 APC2O95996 2303 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 ZNF724A8MTY0 619 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 AGFG2O95081 481 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 NXPH3O95157 252 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 PPYP01298 95 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 HSPB1P04792 205 aaKnown RBP10.59□□□□□ -0.71
RNF220-211ENST00000474956 ZNF674Q2M3X9 581 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 ZNF429Q86V71 674 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 ZDHHC23Q8IYP9 409 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 TMEM252Q8N6L7 170 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 OR1K1Q8NGR3 316 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 PFDN5Q99471 154 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 PLSCR2Q9NRY7 297 aa10.59□□□□□ -0.71
RNF220-211ENST00000474956 LYRM2Q9NU23 88 aaPredicted RBP10.59□□□□□ -0.71
RNF220-211ENST00000474956 IL36GQ9NZH8 169 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms