RNA–Protein interactions for RNA: ENST00000474665.1

LIMD1-204, Transcript of LIM domains containing 1, humanhuman

TSL 3

Gene LIMD1, Length 513 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-204ENST00000474665 CALYQ9NYX4 217 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 OR6C3Q9NZP0 311 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 CCDC59Q9P031 241 aaKnown RBP5.68□□□□□ -1.5
LIMD1-204ENST00000474665 ZNRD1Q9P1U0 126 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 COMMD3Q9UBI1 195 aa5.68□□□□□ -1.5
LIMD1-204ENST00000474665 RSL24D1Q9UHA3 163 aaKnown RBP5.68□□□□□ -1.5
LIMD1-204ENST00000474665 VWFP04275 2813 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 TRAV18A0A075B6X5 111 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 A0A087X0M5 115 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 MDFIC2A0A1B0GVS7 189 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 SMIM31A0A1B0GVY4 71 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 A0A1B0GX30 115 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 A0A1W2PRD5 423 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 A0A1W2PRF3 423 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 A0A1W2PRM7 423 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 FUOMA2VDF0 154 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 FAM172BPA6NC97 362 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 METTL21EPA6NDL7 271 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF729A6NN14 1252 aaPredicted RBP5.67□□□□□ -1.5
LIMD1-204ENST00000474665 F2RL2O00254 374 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 XRCC3O43542 346 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 VENTXO95231 258 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 IGLV1-47P01700 117 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 IGHV3-7P01780 117 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 HLA-DQB1P01920 261 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 APOA1P02647 267 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 MELTFP08582 738 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 EPHA1P21709 976 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 COX7A1P24310 79 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 CD34P28906 385 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 UBE2E1P51965 193 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF134P52741 427 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 GNMTQ14749 295 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 HERPUD1Q15011 391 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 HMGN3Q15651 99 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 UBE2NLQ5JXB2 153 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 HACD4Q5VWC8 232 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 LHFPL4Q7Z7J7 247 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 TRAPPC6BQ86SZ2 158 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 OR11H6Q8NGC7 330 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 NUDCD2Q8WVJ2 157 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 ACOT12Q8WYK0 555 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 MAFIPQ8WZ33 124 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 GCDHQ92947 438 aaPredicted RBP5.67□□□□□ -1.5
LIMD1-204ENST00000474665 LEAP2Q969E1 77 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 DCUN1D5Q9BTE7 237 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 SUCNR1Q9BXA5 334 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 PARP12Q9H0J9 701 aaKnown RBP5.67□□□□□ -1.5
LIMD1-204ENST00000474665 TMEM133Q9H2Q1 129 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 PRDM13Q9H4Q3 707 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 AUNIPQ9H7T9 357 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 TAF9BQ9HBM6 251 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF286AQ9HBT8 521 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 Q9N2K0 584 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 C12orf4Q9NQ89 552 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF230Q9UIE0 474 aaPredicted RBP5.67□□□□□ -1.5
LIMD1-204ENST00000474665 NUP50Q9UKX7 468 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 SESN1Q9Y6P5 492 aa5.67□□□□□ -1.5
LIMD1-204ENST00000474665 A0A0A6YYH2 397 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 IGHV2-26A0A0B4J1V2 119 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 IGHV3-43A0A0B4J1X8 118 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 A0A0U1RQK1 487 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 A0A1W2PPE3 182 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 MEIOCA2RUB1 952 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 TMEM89A2RUT3 159 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 A6NJ64 397 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 SERPINE3A8MV23 424 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 LY6LH3BQJ8 138 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 H3BUI4 141 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 NPFFO15130 113 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 SLC31A2O15432 143 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 ORC5O43913 435 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 HBZP02008 142 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 FCGR3AP08637 254 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 GSTP1P09211 210 aaKnown RBP5.66□□□□□ -1.5
LIMD1-204ENST00000474665 SCTP09683 121 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 CD3GP09693 182 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 IGHV3-43DP0DP04 118 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 GZMHP20718 246 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 SAA4P35542 130 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 SRP14P37108 136 aaKnown RBP5.66□□□□□ -1.5
LIMD1-204ENST00000474665 RANBP1P43487 201 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 GUCA2AQ02747 115 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 MADCAM1Q13477 382 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 LTC4SQ16873 150 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 DEFB112Q30KQ8 113 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 FBLN7Q53RD9 439 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 NCR3LG1Q68D85 454 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF626Q68DY1 528 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF554Q86TJ5 538 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 LAX1Q8IWV1 398 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF565Q8N9K5 539 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 ZNF439Q8NDP4 499 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 OR52L2PQ8NGH6 319 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 OR4P4Q8NGL7 312 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 ARL11Q969Q4 196 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 DGCR14Q96DF8 476 aaKnown RBP5.66□□□□□ -1.5
LIMD1-204ENST00000474665 CMTM3Q96MX0 182 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 SLC6A7Q99884 636 aa5.66□□□□□ -1.5
LIMD1-204ENST00000474665 CMSS1Q9BQ75 279 aaKnown RBP5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms