RNA–Protein interactions for RNA: ENST00000474627.7

ATPAF2-206, Transcript of ATP synthase mitochondrial F1 complex assembly factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATPAF2, Length 1,564 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF2-206ENST00000474627 SYNGR1O43759 233 aa16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 RGS11O94810 467 aa16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 HLA-GP17693 338 aa16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 EGR1P18146 543 aa16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 DVL1P1P54792 670 aaPredicted RBP16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 ARPC4P59998 168 aa16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 SEC61A1P61619 476 aaKnown RBP16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 DHODHQ02127 395 aa16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 DHRS2Q13268 280 aa16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 FAM58AQ8N1B3 248 aa16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 TMEM186Q96B77 213 aa16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 ZNF286AQ9HBT8 521 aa16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 PIPOXQ9P0Z9 390 aa16.25■□□□□ 0.19
ATPAF2-206ENST00000474627 SONP18583 2426 aaKnown RBP16.24■□□□□ 0.19
ATPAF2-206ENST00000474627 OOEPA6NGQ2 149 aa16.24■□□□□ 0.19
ATPAF2-206ENST00000474627 NOS1APO75052 506 aaPredicted RBP16.24■□□□□ 0.19
ATPAF2-206ENST00000474627 WNT2P09544 360 aa16.24■□□□□ 0.19
ATPAF2-206ENST00000474627 RPS2P15880 293 aaKnown RBP16.24■□□□□ 0.19
ATPAF2-206ENST00000474627 LCN2P80188 198 aa16.24■□□□□ 0.19
ATPAF2-206ENST00000474627 TMEM128Q5BJH2 165 aa16.24■□□□□ 0.19
ATPAF2-206ENST00000474627 GON7Q9BXV9 100 aa16.24■□□□□ 0.19
ATPAF2-206ENST00000474627 NECAP2Q9NVZ3 263 aa16.24■□□□□ 0.19
ATPAF2-206ENST00000474627 TMEM160Q9NX00 188 aa16.24■□□□□ 0.19
ATPAF2-206ENST00000474627 MIOXQ9UGB7 285 aa16.24■□□□□ 0.19
ATPAF2-206ENST00000474627 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP16.23■□□□□ 0.192e-6■■■■□ 24.4
ATPAF2-206ENST00000474627 IGHV3OR15-7A0A075B7D8 119 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 TRAV38-1A0A0B4J264 116 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 F5H0A9 414 aaPredicted RBP16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 CRLF1O75462 422 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 HOXB4P17483 251 aaPredicted RBP16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 ZFP36P26651 326 aaKnown RBP16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 CFHR2P36980 270 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 GMFBP60983 142 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 ERVK11-1P61568 191 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 AADACL3Q5VUY0 350 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 DHRS11Q6UWP2 260 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 LYPD2Q6UXB3 125 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 OR2T35Q8NGX2 323 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 MARCH1Q8TCQ1 289 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 MITD1Q8WV92 249 aa16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 HDHD3Q9BSH5 251 aaPredicted RBP16.23■□□□□ 0.19
ATPAF2-206ENST00000474627 TRAV20A0A0B4J274 112 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 A0A0B4J2A0 478 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 C9orf170A2RU37 121 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 MCRIP1C9JLW8 97 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 F8VVB4 439 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 F8VWA3 439 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 RHBDL1O75783 438 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 DUS4LO95620 317 aaKnown RBP16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 HLA-AP01891 365 aaKnown RBP16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 RIPPLY3P57055 190 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 RBM39Q14498 530 aaKnown RBP16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 CR1LQ2VPA4 569 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 ESCO2Q56NI9 601 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 ZNF660Q6AZW8 331 aaPredicted RBP16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 FAM90A1Q86YD7 464 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 NEIL1Q96FI4 390 aaPredicted RBP16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 SLA2Q9H6Q3 261 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 ZNF581Q9P0T4 197 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 SHPKQ9UHJ6 478 aa16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 NIPBLQ6KC79 2804 aaeCLIP16.22■□□□□ 0.19
ATPAF2-206ENST00000474627 IGKV1D-8A0A087WSZ0 117 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 TRBV6-6A0A0A6YYG2 114 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 SRRM5B3KS81 715 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 SMLR1H3BR10 107 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 PHF1O43189 567 aaPredicted RBP16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 FOXH1O75593 365 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 NAPSAO96009 420 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 GYPAP02724 150 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 PGA5P0DJD9 388 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 PRKACAP17612 351 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 IL13RA1P78552 427 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 IFITM2Q01629 132 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 SRSF4Q08170 494 aaKnown RBP16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 PPP1R1AQ13522 171 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 FAM120AOSQ5T036 256 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 TEX36Q5VZQ5 186 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 OR8B3Q8NGG8 313 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 OR10Z1Q8NGY1 313 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 CYYR1Q96J86 154 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 OR8B2Q96RD0 313 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 PHB2Q99623 299 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 NRIP2Q9BQI9 281 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 TMPRSS13Q9BYE2 586 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 SHARPINQ9H0F6 387 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 C5orf66Q9H5L9 145 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 NF1P21359 2839 aa16.21■□□□□ 0.19
ATPAF2-206ENST00000474627 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 SLC22A5O76082 557 aa16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 OR5H8P0DN80 308 aa16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 CD34P28906 385 aa16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 IKZF1Q13422 519 aa16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 LAMTOR1Q6IAA8 161 aa16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 IL17RELQ6ZVW7 336 aa16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 C9orf62Q8N4C0 152 aa16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 MAFIPQ8WZ33 124 aa16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 WDR13Q9H1Z4 485 aa16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 OPN4Q9UHM6 478 aa16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 CDC42EP3Q9UKI2 254 aa16.21■□□□□ 0.18
ATPAF2-206ENST00000474627 MGAT4AQ9UM21 535 aa16.21■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms