RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 TBX15Q96SF7 602 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 LPAR2Q9HBW0 351 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 KIAA1324LA8MWY0 1029 aaPredicted RBP15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 PLA2G5P39877 138 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 RBM11P57052 281 aaKnown RBP15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 RNPS1Q15287 305 aaKnown RBP15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 IZUMO4Q1ZYL8 232 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 KIAA0895LQ68EN5 471 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 OR5D13Q8NGL4 314 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 SPTSSAQ969W0 71 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 SDSLQ96GA7 329 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 MS4A10Q96PG2 267 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 REPIN1Q9BWE0 567 aaKnown RBP15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 CCL28Q9NRJ3 127 aa15.95■□□□□ 0.14
ECHDC1-214ENST00000474289 AQP7P3A6NL99 342 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 ZNF705FA8MVS1 300 aaPredicted RBP15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 ZNF705DP0CH99 300 aaPredicted RBP15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 ZNF705BP0CI00 300 aaPredicted RBP15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 OR1L3Q8NH93 324 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 MRPL30Q8TCC3 161 aaKnown RBP15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 ANAPC16Q96DE5 110 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 RAB40CQ96S21 281 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 GPR27Q9NS67 375 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 EPOPA6NHQ4 379 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 C10orf142B7Z368 130 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 NUPR1O60356 82 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 BRS3P32247 399 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 DMRTA1Q5VZB9 504 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 KLHDC7BQ96G42 594 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 PLA2G3Q9NZ20 509 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 ASXL3Q9C0F0 2248 aa15.94■□□□□ 0.14
ECHDC1-214ENST00000474289 LILRA5A6NI73 299 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 H0Y980 276 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 TMEM250H0YL14 139 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 GALR2O43603 387 aaPredicted RBP15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 SCTP09683 121 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 BLKP51451 505 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 MRPS21P82921 87 aaKnown RBP15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 TESK1Q15569 626 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 LRRC75BQ2VPJ9 315 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 C10orf128Q5T292 105 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 HAPLN4Q86UW8 402 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 GPR146Q96CH1 333 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 LILRA1O75019 489 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 CNOT4O95628 575 aaKnown RBP15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 NRASP01111 189 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 IGKV1D-33P01593 117 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 IGKV1-33P01594 117 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 SRP14P37108 136 aaKnown RBP15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 PRDX4Q13162 271 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 CALHM1Q8IU99 346 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 RPP25LQ8N5L8 163 aaKnown RBP15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 LMX1AQ8TE12 382 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 ZCCHC14Q8WYQ9 949 aaKnown RBP15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 IL22RA2Q969J5 263 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 RBM24Q9BX46 236 aaKnown RBP15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 CHRNA10Q9GZZ6 450 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 IL36GQ9NZH8 169 aa15.93■□□□□ 0.14
ECHDC1-214ENST00000474289 HMGB3O15347 200 aaKnown RBP15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 LCATP04180 440 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 IAPPP10997 89 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 SELEP16581 610 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 CD33P20138 364 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 TDRG1Q3Y452 100 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 ARL6IP6Q8N6S5 226 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 PINX1Q96BK5 328 aaKnown RBP15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 RASL10BQ96S79 203 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 SLC39A9Q9NUM3 307 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 GYPAP02724 150 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 IL3RAP26951 378 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 Q6ZRM9 215 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 DEFB119Q8N690 84 aa15.92■□□□□ 0.14
ECHDC1-214ENST00000474289 CFAP54Q96N23 3096 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 PIAS2O75928 621 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 DRD1P21728 446 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 GCH1P30793 250 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 PTGDSP41222 190 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 TNFSF10P50591 281 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 RPL15P61313 204 aaKnown RBP15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 CST9LP1Q5W188 147 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 FOXL2NBQ6ZUU3 175 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 DTD1Q8TEA8 209 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 RNF138Q8WVD3 245 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 EXTL1Q92935 676 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 MIEN1Q9BRT3 115 aa15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 WDR61Q9GZS3 305 aaKnown RBP15.91■□□□□ 0.14
ECHDC1-214ENST00000474289 LOC102725191A0A1B0GVB3 256 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 PGLYRP1O75594 196 aaPredicted RBP15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 TUSC2O75896 110 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 CRYGSP22914 178 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 MSX1P28360 303 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 PSMB3P49720 205 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 TMEM42Q69YG0 159 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 OR4F5Q8NH21 305 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 GATAD1Q8WUU5 269 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 RLN3Q8WXF3 142 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 ZNF385AQ96PM9 386 aaKnown RBP15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 OR4F4Q96R69 305 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 IMMP2LQ96T52 175 aa15.9■□□□□ 0.14
ECHDC1-214ENST00000474289 C20orf144Q9BQM9 153 aa15.9■□□□□ 0.14
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms