RNA–Protein interactions for RNA: ENST00000474020.5

ATPAF1-204, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 535 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-204ENST00000474020 TMEM268Q5VZI3 342 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 CALHM1Q8IU99 346 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 C17orf78Q8N4C9 275 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 CNEP1R1Q8N9A8 125 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 SUMF2Q8NBJ7 301 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 BHLHE23Q8NDY6 225 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 LFNGQ8NES3 379 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 BPIFCQ8NFQ6 507 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 HPSE2Q8WWQ2 592 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 DYRK2Q92630 601 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 LRRC46Q96FV0 321 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 C18orf12Q96KH6 178 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 TRIB1Q96RU8 372 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 SLX1AQ9BQ83 275 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 ADAT1Q9BUB4 502 aaKnown RBP5□□□□□ -1.61
ATPAF1-204ENST00000474020 PBDC1Q9BVG4 233 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 TMEM222Q9H0R3 208 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 IFT22Q9H7X7 185 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 PARP11Q9NR21 331 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 TMEM100Q9NV29 134 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 OR5AC2Q9NZP5 309 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 ZNF629Q9UEG4 869 aaPredicted RBP5□□□□□ -1.61
ATPAF1-204ENST00000474020 PRSS50Q9UI38 385 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 TRAPPC2LQ9UL33 140 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 KIAA1549Q9HCM3 1950 aa5□□□□□ -1.61
ATPAF1-204ENST00000474020 EML6Q6ZMW3 1958 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 A0A1W2PNU3 283 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 CDRT15L2A8MXV6 281 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 AHRRA9YTQ3 701 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 F8W036 122 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 H0Y980 276 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 LGALS8O00214 317 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 HSPB6O14558 160 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 SMPD2O60906 423 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 DFFBO76075 338 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 LY86O95711 162 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 NAPSAO96009 420 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 NGFP01138 241 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 IGHG3P01860 377 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 MBPP02686 304 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 PRH1P02810 166 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 SEC11BP0C7V7 166 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 CBR1P16152 277 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 VDAC1P21796 283 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 CA6P23280 308 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 CD200P41217 278 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 NPBWR2P48146 333 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 KCNJ3P48549 501 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 SULT1A2P50226 295 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 IDH3GP51553 393 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 CAV2P51636 162 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 TMEM33P57088 247 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 RPL23AP62750 156 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 BAXQ07812 192 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 IL15RAQ13261 267 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 BTN1A1Q13410 526 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 PEA15Q15121 130 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 SP6Q3SY56 376 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 SHEQ5VZ18 495 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 RPL7L1Q6DKI1 246 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 OR2T2Q6IF00 324 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 SLC25A24Q6NUK1 477 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 Q6ZT83 130 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 TBC1D26Q86UD7 250 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 STX12Q86Y82 276 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 LDLRAD3Q86YD5 345 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 UBAC2Q8NBM4 344 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 DEFB124Q8NES8 71 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 OR5D13Q8NGL4 314 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 OR1S2Q8NGQ3 325 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 OR1J1Q8NGS3 322 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 LILRB1Q8NHL6 650 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 PPP1R35Q8TAP8 253 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 RDH5Q92781 318 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 GNPNAT1Q96EK6 184 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 RRNAD1Q96FB5 475 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 MARS2Q96GW9 593 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 AKR1E2Q96JD6 320 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 TMEM56Q96MV1 263 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 BCL2L14Q9BZR8 327 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 NKX6-2Q9C056 277 aaPredicted RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 CXXC4Q9H2H0 198 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 OR51B6Q9H340 312 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 OR51I2Q9H344 312 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 HRH4Q9H3N8 390 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 PLEKHF2Q9H8W4 249 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 RAB9BQ9NP90 201 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 CYTL1Q9NRR1 136 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 LIN7CQ9NUP9 197 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 TREM2Q9NZC2 230 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 MTCH1Q9NZJ7 389 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 TAAR3PQ9P1P4 343 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 SPRR3Q9UBC9 169 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 CLCF1Q9UBD9 225 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 FBXL17Q9UF56 701 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 KCNS2Q9ULS6 477 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 PROCRQ9UNN8 238 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 RCL1Q9Y2P8 373 aaKnown RBP4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 AMDHD2Q9Y303 409 aa4.99□□□□□ -1.61
ATPAF1-204ENST00000474020 OR2W1Q9Y3N9 320 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms