RNA–Protein interactions for RNA: ENST00000473565.5

CLK1-210, Transcript of CDC like kinase 1, humanhuman

TSL 1 (best)

Gene CLK1, Length 3,208 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-210ENST00000473565 TMEM30CPA0ZSE6 113 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 DEFB108AA8MXU0 73 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 SHISA9B4DS77 424 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 SCGB1D2O95969 90 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 OR8U9P0C7N5 309 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 KCNJ3P48549 501 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 ASCL1P50553 236 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 RAB32Q13637 225 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 TESK1Q15569 626 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 IAH1Q2TAA2 248 aaPredicted RBP5.21□□□□□ -1.58
CLK1-210ENST00000473565 KRBOX4Q5JUW0 171 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 UTF1Q5T230 341 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 GGNBP1Q5YKI7 109 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 C11orf87Q6NUJ2 197 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 LPCAT3Q6P1A2 487 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 TEX261Q6UWH6 196 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 C1orf174Q8IYL3 243 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 ZNF680Q8NEM1 530 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 NUP37Q8NFH4 326 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 OR10V1Q8NGI7 309 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 OR4A4PQ8NGN8 299 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 OR8U1Q8NH10 309 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 OR51H1Q8NH63 302 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 PRR7Q8TB68 274 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 RAB18Q9NP72 206 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 PPP1R3CQ9UQK1 317 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 MAB21L2Q9Y586 359 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 U3KQ87 197 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 CENPEQ02224 2701 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 TRBV6-6A0A0A6YYG2 114 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 MPPED1O15442 326 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 ZNF737O75373 536 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 NXPH3O95157 252 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 HBZP02008 142 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 ACAA1P09110 424 aaPredicted RBP5.21□□□□□ -1.58
CLK1-210ENST00000473565 OMGP23515 440 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 LMO1P25800 156 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 PSMB6P28072 239 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 CHRNB4P30926 498 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 CEACAM6P40199 344 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 MDH2P40926 338 aaKnown RBP5.21□□□□□ -1.58
CLK1-210ENST00000473565 ECI1P42126 302 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 TLE1Q04724 770 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 EXOSC2Q13868 293 aaKnown RBP5.21□□□□□ -1.58
CLK1-210ENST00000473565 H1FOOQ8IZA3 346 aaPredicted RBP5.21□□□□□ -1.58
CLK1-210ENST00000473565 GALNT11Q8NCW6 608 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 MSI2Q96DH6 328 aaKnown RBP5.21□□□□□ -1.58
CLK1-210ENST00000473565 RBMXL1Q96E39 390 aaKnown RBP5.21□□□□□ -1.58
CLK1-210ENST00000473565 RRNAD1Q96FB5 475 aaKnown RBP5.21□□□□□ -1.58
CLK1-210ENST00000473565 PIK3IP1Q96FE7 263 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 RHOFQ9HBH0 211 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 MBNL3Q9NUK0 354 aaKnown RBP5.21□□□□□ -1.58
CLK1-210ENST00000473565 GLS2Q9UI32 602 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 KCNS2Q9ULS6 477 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 OR2W1Q9Y3N9 320 aa5.21□□□□□ -1.58
CLK1-210ENST00000473565 RBM7Q9Y580 266 aaKnown RBP5.21□□□□□ -1.58
CLK1-210ENST00000473565 C3orf85A0A1B0GTC6 90 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 RNF222A6NCQ9 220 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 MSGN1A6NI15 193 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 HMSDA8MTL9 139 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 ERVH48-1M5A8F1 160 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 SPDEFO95238 335 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 GYPAP02724 150 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 GLAP06280 429 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 S100A11P31949 105 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 PPP1CCP36873 323 aaKnown RBP5.2□□□□□ -1.58
CLK1-210ENST00000473565 UCP3P55916 312 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 EDDM3BP56851 147 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 LINC00205P59089 165 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 SRSF4Q08170 494 aaKnown RBP5.2□□□□□ -1.58
CLK1-210ENST00000473565 HMGN3Q15651 99 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 SRSF7Q16629 238 aaKnown RBP eCLIP5.2□□□□□ -1.58
CLK1-210ENST00000473565 IZUMO4Q1ZYL8 232 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 TMEM268Q5VZI3 342 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 FAM90A1Q86YD7 464 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 FAM216BQ8N7L0 139 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 CA5BP1Q8WTZ4 195 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 DCUN1D4Q92564 292 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 CCL13Q99616 98 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 CABLES2Q9BTV7 478 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 RNF126Q9BV68 326 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 COQ3Q9NZJ6 369 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 PCDHB10Q9UN67 800 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 KCNIP3Q9Y2W7 256 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 A0A0B4J2A0 478 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 POM121CA8CG34 1229 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 B8ZZF3 427 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 GPR31O00270 319 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 LHBP01229 141 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 IGLV2-14P01704 120 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 RPA2P15927 270 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 ZNF16P17020 682 aaPredicted RBP5.2□□□□□ -1.58
CLK1-210ENST00000473565 IL2RGP31785 369 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 MZT1Q08AG7 82 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 NCMAPQ5T1S8 102 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 SHEQ5VZ18 495 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 ALKAL2Q6UX46 152 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 CLEC9AQ6UXN8 241 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 LIAT1Q6ZQX7 453 aa5.2□□□□□ -1.58
CLK1-210ENST00000473565 OR8H3Q8N146 312 aa5.2□□□□□ -1.58
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms