RNA–Protein interactions for RNA: ENST00000473079.1

EPHB3-202, Transcript of EPH receptor B3, humanhuman

TSL 2

Gene EPHB3, Length 486 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHB3-202ENST00000473079 C12orf77C9JDV5 145 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 CCRL2O00421 344 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 HSD17B6O14756 317 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 TMEM11P17152 192 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 GP2P55259 537 aaKnown RBP16.48■□□□□ 0.23
EPHB3-202ENST00000473079 GPR50Q13585 617 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 HES1Q14469 280 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 C6orf183Q5T699 404 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 SYT6Q5T7P8 510 aaPredicted RBP16.48■□□□□ 0.23
EPHB3-202ENST00000473079 TRAT1Q6PIZ9 186 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 C5orf56Q8N8D9 126 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 OR4X2Q8NGF9 303 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 PHYHIPQ92561 330 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 SCN3BQ9NY72 215 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 NKX1-2Q9UD57 310 aaPredicted RBP16.48■□□□□ 0.23
EPHB3-202ENST00000473079 TRAPPC2LQ9UL33 140 aa16.48■□□□□ 0.23
EPHB3-202ENST00000473079 LSM2Q9Y333 95 aaKnown RBP16.48■□□□□ 0.23
EPHB3-202ENST00000473079 TCRBV4S1A1TA0A5B7 111 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 PTGES3LE9PB15 166 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 H0YHG0 523 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 SPINT2O43291 252 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 CRTAPO75718 401 aaPredicted RBP16.47■□□□□ 0.23
EPHB3-202ENST00000473079 IGKV1D-33P01593 117 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 IGKV1-33P01594 117 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 UBBP0CG47 229 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 CD37P11049 281 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 SPHARQ15513 63 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 C9orf152Q5JTZ5 239 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 STEAP3Q658P3 488 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 SIGIRRQ6IA17 410 aa16.47■□□□□ 0.23
EPHB3-202ENST00000473079 IL3RAP26951 378 aa16.46■□□□□ 0.23
EPHB3-202ENST00000473079 ZNF137PP52743 207 aa16.46■□□□□ 0.23
EPHB3-202ENST00000473079 C1orf100Q5SVJ3 147 aa16.46■□□□□ 0.23
EPHB3-202ENST00000473079 SLC25A48Q6ZT89 311 aaKnown RBP16.46■□□□□ 0.23
EPHB3-202ENST00000473079 REC114Q7Z4M0 266 aa16.46■□□□□ 0.23
EPHB3-202ENST00000473079 ZNF554Q86TJ5 538 aa16.46■□□□□ 0.23
EPHB3-202ENST00000473079 IZUMO1Q8IYV9 350 aa16.46■□□□□ 0.23
EPHB3-202ENST00000473079 ZNF439Q8NDP4 499 aa16.46■□□□□ 0.23
EPHB3-202ENST00000473079 OR4K15Q8NH41 348 aa16.46■□□□□ 0.23
EPHB3-202ENST00000473079 UBALD1Q8TB05 177 aa16.46■□□□□ 0.23
EPHB3-202ENST00000473079 CST11Q9H112 138 aa16.46■□□□□ 0.23
EPHB3-202ENST00000473079 MBNL3Q9NUK0 354 aaKnown RBP16.46■□□□□ 0.23
EPHB3-202ENST00000473079 PLXNB1O43157 2135 aa16.46■□□□□ 0.23
EPHB3-202ENST00000473079 PRKDCP78527 4128 aaKnown RBP16.46■□□□□ 0.22
EPHB3-202ENST00000473079 A0A1W2PRX2 142 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 PDCD6O75340 191 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 HBZP02008 142 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 RCC1P18754 421 aaPredicted RBP16.45■□□□□ 0.22
EPHB3-202ENST00000473079 CD1BP29016 333 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 SLC35A2P78381 396 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 GABPB1Q06547 395 aaPredicted RBP16.45■□□□□ 0.22
EPHB3-202ENST00000473079 HNF4GQ14541 408 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 INSL4Q14641 139 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 IRF3Q14653 427 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 OXLD1Q5BKU9 147 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 FAM53AQ6NSI3 398 aaPredicted RBP16.45■□□□□ 0.22
EPHB3-202ENST00000473079 C10orf99Q6UWK7 81 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 MOB3BQ86TA1 216 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 LRRTM1Q86UE6 522 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 Q8N6K4 173 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 NRG4Q8WWG1 115 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 RTN4IP1Q8WWV3 396 aaPredicted RBP16.45■□□□□ 0.22
EPHB3-202ENST00000473079 EAF1Q96JC9 268 aaPredicted RBP16.45■□□□□ 0.22
EPHB3-202ENST00000473079 DUSP21Q9H596 190 aa16.45■□□□□ 0.22
EPHB3-202ENST00000473079 IGHV3-43A0A0B4J1X8 118 aa16.44■□□□□ 0.22
EPHB3-202ENST00000473079 PSMB11A5LHX3 300 aa16.44■□□□□ 0.22
EPHB3-202ENST00000473079 TXNL1O43396 289 aa16.44■□□□□ 0.22
EPHB3-202ENST00000473079 IGHG2P01859 326 aa16.44■□□□□ 0.22
EPHB3-202ENST00000473079 IGHV3-43DP0DP04 118 aa16.44■□□□□ 0.22
EPHB3-202ENST00000473079 GLT8D1Q68CQ7 371 aa16.44■□□□□ 0.22
EPHB3-202ENST00000473079 OR2T10Q8NGZ9 312 aa16.44■□□□□ 0.22
EPHB3-202ENST00000473079 CHPT1Q8WUD6 406 aa16.44■□□□□ 0.22
EPHB3-202ENST00000473079 TMED9Q9BVK6 235 aa16.44■□□□□ 0.22
EPHB3-202ENST00000473079 GNG12Q9UBI6 72 aa16.44■□□□□ 0.22
EPHB3-202ENST00000473079 UBE2QL1A1L167 161 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 PF4V1P10720 104 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 SRMP19623 302 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 VHLP40337 213 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 REG1BP48304 166 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 ZNF134P52741 427 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 AQP4P55087 323 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 MED22Q15528 200 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 CT45A1Q5HYN5 189 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 FAM27D1Q5T7N8 215 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 TGIF2LXQ8IUE1 241 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 OR1L1Q8NH94 360 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 CT45A3Q8NHU0 189 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 TAF9BQ9HBM6 251 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 TPRKBQ9Y3C4 175 aa16.43■□□□□ 0.22
EPHB3-202ENST00000473079 SLC31A2O15432 143 aa16.42■□□□□ 0.22
EPHB3-202ENST00000473079 UCHL1P09936 223 aa16.42■□□□□ 0.22
EPHB3-202ENST00000473079 HSD17B12Q53GQ0 312 aa16.42■□□□□ 0.22
EPHB3-202ENST00000473079 CEACAM19Q7Z692 300 aa16.42■□□□□ 0.22
EPHB3-202ENST00000473079 MRPL30Q8TCC3 161 aaKnown RBP16.42■□□□□ 0.22
EPHB3-202ENST00000473079 SGCDQ92629 289 aa16.42■□□□□ 0.22
EPHB3-202ENST00000473079 FAM46BQ96A09 425 aa16.42■□□□□ 0.22
EPHB3-202ENST00000473079 ISYNA1Q9NPH2 558 aa16.42■□□□□ 0.22
EPHB3-202ENST00000473079 KCNIP1Q9NZI2 227 aa16.42■□□□□ 0.22
EPHB3-202ENST00000473079 LRRC42Q9Y546 428 aa16.42■□□□□ 0.22
EPHB3-202ENST00000473079 IGHV3-72A0A0B4J1Y9 119 aa16.41■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms