RNA–Protein interactions for RNA: ENST00000472679.1

CLK1-209, Transcript of CDC like kinase 1, humanhuman

TSL 2

Gene CLK1, Length 461 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK1-209ENST00000472679 C1QTNF8P60827 252 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 BSPH1Q075Z2 132 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 BSXQ3C1V8 233 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 SDIM1Q6ZPB5 146 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 ACBD4Q8NC06 268 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 ZNF251Q9BRH9 671 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 OR51E2Q9H255 320 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 CXCL16Q9H2A7 254 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 WASHC3Q9Y3C0 194 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 HEY1Q9Y5J3 304 aa1.86□□□□□ -2.11
CLK1-209ENST00000472679 ZNF638Q14966 1978 aaKnown RBP1.85□□□□□ -2.11
CLK1-209ENST00000472679 A0A0J9YX75 114 aa1.85□□□□□ -2.11
CLK1-209ENST00000472679 CST4P01036 141 aa1.85□□□□□ -2.11
CLK1-209ENST00000472679 EBLN2Q6P2I7 272 aa1.85□□□□□ -2.11
CLK1-209ENST00000472679 OR11L1Q8NGX0 322 aa1.85□□□□□ -2.11
CLK1-209ENST00000472679 IFT81Q8WYA0 676 aa1.85□□□□□ -2.11
CLK1-209ENST00000472679 GOLPH3Q9H4A6 298 aa1.85□□□□□ -2.11
CLK1-209ENST00000472679 HAUS4Q9H6D7 363 aa1.85□□□□□ -2.11
CLK1-209ENST00000472679 METTL8Q9H825 291 aaKnown RBP1.85□□□□□ -2.11
CLK1-209ENST00000472679 MRM2Q9UI43 246 aaKnown RBP1.85□□□□□ -2.11
CLK1-209ENST00000472679 MINOS1-NBL1R4GNA1 71 aa1.85□□□□□ -2.11
CLK1-209ENST00000472679 ABCB11O95342 1321 aa1.85□□□□□ -2.11
CLK1-209ENST00000472679 RAB3GAP2Q9H2M9 1393 aa1.85□□□□□ -2.11
CLK1-209ENST00000472679 GOLGA8IPA6NC78 632 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 DENRO43583 198 aaKnown RBP1.84□□□□□ -2.11
CLK1-209ENST00000472679 AKR1C4P17516 323 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 SKP2Q13309 424 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 OR10J3Q5JRS4 329 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 TMEM25Q86YD3 366 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 ZNRF2Q8NHG8 242 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 DTD1Q8TEA8 209 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 TMEM239Q8WW34 195 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 MRAP2Q96G30 205 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 MSANTD3Q96H12 275 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 DNAJC30Q96LL9 226 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 FAM206AQ9NX38 181 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 ENPP5Q9UJA9 477 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 POFUT2Q9Y2G5 429 aa1.84□□□□□ -2.11
CLK1-209ENST00000472679 A0A1W2PQL4 384 aaPredicted RBP1.83□□□□□ -2.12
CLK1-209ENST00000472679 VPS37CA5D8V6 355 aaPredicted RBP1.83□□□□□ -2.12
CLK1-209ENST00000472679 F8VP50 259 aa1.83□□□□□ -2.12
CLK1-209ENST00000472679 K7EQS6 105 aa1.83□□□□□ -2.12
CLK1-209ENST00000472679 TRAPPC3O43617 180 aa1.83□□□□□ -2.12
CLK1-209ENST00000472679 SPAM1P38567 509 aa1.83□□□□□ -2.12
CLK1-209ENST00000472679 OR2B6P58173 313 aa1.83□□□□□ -2.12
CLK1-209ENST00000472679 PDGFRLQ15198 375 aa1.83□□□□□ -2.12
CLK1-209ENST00000472679 MUC15Q8N387 334 aa1.83□□□□□ -2.12
CLK1-209ENST00000472679 OR5D18Q8NGL1 313 aa1.83□□□□□ -2.12
CLK1-209ENST00000472679 C11orf49Q9H6J7 331 aa1.83□□□□□ -2.12
CLK1-209ENST00000472679 METTL17Q9H7H0 456 aaPredicted RBP1.83□□□□□ -2.12
CLK1-209ENST00000472679 PSORS1C2Q9UIG4 136 aa1.83□□□□□ -2.12
CLK1-209ENST00000472679 DOCK10Q96BY6 2186 aa1.83□□□□□ -2.12
CLK1-209ENST00000472679 DNMT1P26358 1616 aaKnown RBP1.83□□□□□ -2.12
CLK1-209ENST00000472679 PRRC2BQ5JSZ5 2229 aaKnown RBP1.83□□□□□ -2.12
CLK1-209ENST00000472679 ATAD5Q96QE3 1844 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 ERICH4A6NGS2 130 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 B4DEV8 164 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 FNDC10F2Z333 226 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 CRXO43186 299 aaPredicted RBP1.82□□□□□ -2.12
CLK1-209ENST00000472679 CDK14O94921 469 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 LDOC1O95751 146 aaPredicted RBP1.82□□□□□ -2.12
CLK1-209ENST00000472679 SOD1P00441 154 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 OR4A8P0C604 315 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 PSMA1P25786 263 aaKnown RBP1.82□□□□□ -2.12
CLK1-209ENST00000472679 UGT2B10P36537 528 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 PSG3Q16557 428 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 MRPL52Q86TS9 123 aaKnown RBP1.82□□□□□ -2.12
CLK1-209ENST00000472679 ERMNQ8TAM6 284 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 GTF2H4Q92759 462 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 KRTAP4-1Q9BYQ7 146 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 C16orf95Q9H693 158 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 MYO5BQ9ULV0 1848 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 PTPRKQ15262 1439 aa1.82□□□□□ -2.12
CLK1-209ENST00000472679 HELZ2Q9BYK8 2649 aaKnown RBP1.81□□□□□ -2.12
CLK1-209ENST00000472679 A0A1B0GX12 115 aa1.81□□□□□ -2.12
CLK1-209ENST00000472679 H3BRN7 92 aa1.81□□□□□ -2.12
CLK1-209ENST00000472679 RAB36O95755 333 aa1.81□□□□□ -2.12
CLK1-209ENST00000472679 ZNF117Q03924 483 aa1.81□□□□□ -2.12
CLK1-209ENST00000472679 LRRC6Q86X45 466 aa1.81□□□□□ -2.12
CLK1-209ENST00000472679 C2orf73Q8N5S3 287 aaPredicted RBP1.81□□□□□ -2.12
CLK1-209ENST00000472679 YIPF7Q8N8F6 280 aa1.81□□□□□ -2.12
CLK1-209ENST00000472679 GALMQ96C23 342 aa1.81□□□□□ -2.12
CLK1-209ENST00000472679 SIKE1Q9BRV8 207 aa1.81□□□□□ -2.12
CLK1-209ENST00000472679 BOLA2-SMG1P6H3BVE0 249 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 GPR171O14626 319 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 SGCEO43556 437 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 IVLP07476 585 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 CTSEP14091 401 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 GABARAPL2P60520 117 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 STX3Q13277 289 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 FLOT2Q14254 428 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 PAFAH1B3Q15102 231 aaKnown RBP1.8□□□□□ -2.12
CLK1-209ENST00000472679 ANGPTL6Q8NI99 470 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 NAP1L5Q96NT1 182 aaPredicted RBP1.8□□□□□ -2.12
CLK1-209ENST00000472679 UPK3BQ9BT76 320 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 DMAC2Q9NW81 257 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 ADAMTSL1Q8N6G6 1762 aa1.8□□□□□ -2.12
CLK1-209ENST00000472679 MUC21A0A0G2JKD1 596 aa1.79□□□□□ -2.12
CLK1-209ENST00000472679 MUC21A0A140T8X8 626 aa1.79□□□□□ -2.12
CLK1-209ENST00000472679 NQO1P15559 274 aaKnown RBP1.79□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms