RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 ZNF488Q96MN9 340 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 OPALINQ96PE5 141 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 TEAD3Q99594 435 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 NIPSNAP1Q9BPW8 284 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 OSBPL10Q9BXB5 764 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 CADM1Q9BY67 442 aaKnown RBP2.76□□□□□ -1.97
XRN1-209ENST00000472625 BARHL1Q9BZE3 327 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 FAM107BQ9H098 131 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 COMMD4Q9H0A8 199 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 GHITMQ9H3K2 345 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 MED20Q9H944 212 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 SPACA1Q9HBV2 294 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 LIN7CQ9NUP9 197 aaKnown RBP2.76□□□□□ -1.97
XRN1-209ENST00000472625 FAM118AQ9NWS6 357 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 PAK1IP1Q9NWT1 392 aaPredicted RBP2.76□□□□□ -1.97
XRN1-209ENST00000472625 WARS2Q9UGM6 360 aaKnown RBP2.76□□□□□ -1.97
XRN1-209ENST00000472625 ERGIC3Q9Y282 383 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 ZNF256Q9Y2P7 627 aaPredicted RBP2.76□□□□□ -1.97
XRN1-209ENST00000472625 SMAD5-AS1Q9Y6J3 95 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 DNAH1Q9P2D7 4330 aa2.76□□□□□ -1.97
XRN1-209ENST00000472625 HUWE1Q7Z6Z7 4374 aaKnown RBP2.76□□□□□ -1.97
XRN1-209ENST00000472625 COL7A1Q02388 2944 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 IGKV2D-30A0A075B6S6 120 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 KBTBD11-OT1A0A1B0GTJ5 212 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 LOC107986453A0A1B0GWG9 222 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 METTL15A6NJ78 407 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 SEC14L6B5MCN3 397 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 H3BNX3 289 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 CCL24O00175 119 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 SIRPB1O00241 398 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 HSD17B6O14756 317 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 ATP8B1O43520 1251 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 ZNF780AO75290 641 aaPredicted RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 ENTPD6O75354 484 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 KDM4BO94953 1096 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 OR2H2O95918 312 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 IGHG2P01859 326 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 MT-ND2P03891 347 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 CSTBP04080 98 aaKnown RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 GAPDHP04406 335 aaKnown RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 ISG15P05161 165 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 CD2P06729 351 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 PSG1P11464 419 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 LYL1P12980 280 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 NFYBP25208 207 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 CD40LGP29965 261 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 HTR1FP30939 366 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 HOXD3P31249 432 aaPredicted RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 GLP1RP43220 463 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 OR3A1P47881 315 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 CDX1P47902 265 aaPredicted RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 GLIPR1P48060 266 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 CRISP1P54107 249 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 NANOS2P60321 138 aaKnown RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 ISL1P61371 349 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 MFGE8Q08431 387 aaPredicted RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 ZNF816Q0VGE8 651 aaPredicted RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 GPR50Q13585 617 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 FLOT2Q14254 428 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 IL13RA2Q14627 380 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 KIR2DS1Q14954 304 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 PNLIPRP3Q17RR3 467 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 PIK3CD-AS1Q5SR53 167 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 PRAMEF5Q5TYX0 476 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 PYHIN1Q6K0P9 492 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 TRAT1Q6PIZ9 186 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 C9orf47Q6ZRZ4 202 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 MEPCEQ7L2J0 689 aaKnown RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 CATSPERDQ86XM0 798 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 LYPD6Q86Y78 171 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 DYNAPQ8N1N2 210 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 STPG2Q8N412 459 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 TCTEX1D1Q8N7M0 179 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 C5orf56Q8N8D9 126 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 C8orf31Q8N9H6 132 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 OR10H4Q8NGA5 316 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 OR51T1Q8NGJ9 327 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 OR8J1Q8NGP2 316 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 OR6Q1Q8NGQ2 317 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 OR2T10Q8NGZ9 312 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 OR56B4Q8NH76 319 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 MUC7Q8TAX7 377 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 TMEM163Q8TC26 289 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 MRGPRDQ8TDS7 321 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 C4orf3Q8WVX3 66 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 SLAMF9Q96A28 289 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 ISOC1Q96CN7 298 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 CCDC124Q96CT7 223 aaKnown RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 IL4I1Q96RQ9 567 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 P2RX4Q99571 388 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 S100A13Q99584 98 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 RASL11BQ9BPW5 248 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 FGF23Q9GZV9 251 aaPredicted RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 CHST6Q9GZX3 395 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 PPP1R3EQ9H7J1 279 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 ADGRL4Q9HBW9 690 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 HMG20AQ9NP66 347 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 ARL8BQ9NVJ2 186 aa2.75□□□□□ -1.97
XRN1-209ENST00000472625 RBFOX1Q9NWB1 397 aaKnown RBP2.75□□□□□ -1.97
XRN1-209ENST00000472625 TVP23BQ9NYZ1 205 aa2.75□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms