RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 SELENOIQ9C0D9 397 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 DCLRE1BQ9H816 532 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 GFOD1Q9NXC2 390 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 ETAA1Q9NY74 926 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 NKX1-2Q9UD57 310 aaPredicted RBP7.16□□□□□ -1.26
USF1-204ENST00000472217 TRAPPC2LQ9UL33 140 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 ERGIC3Q9Y282 383 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 TSSC4Q9Y5U2 329 aaPredicted RBP7.16□□□□□ -1.26
USF1-204ENST00000472217 PEX16Q9Y5Y5 336 aa7.16□□□□□ -1.26
USF1-204ENST00000472217 IGHV3-72A0A0B4J1Y9 119 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 TCRBV4S1A1TA0A5B7 111 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 FAM90A10PA6NDY2 464 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 FAM90A7PA6NKC0 464 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 FAM90A23PA8MXZ1 464 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 SLC31A2O15432 143 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 FGF16O43320 207 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 SC5DO75845 299 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 HBZP02008 142 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 GAPDHP04406 335 aaKnown RBP7.15□□□□□ -1.26
USF1-204ENST00000472217 PF4V1P10720 104 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 GP2P55259 537 aaKnown RBP7.15□□□□□ -1.26
USF1-204ENST00000472217 GABPB1Q06547 395 aaPredicted RBP7.15□□□□□ -1.26
USF1-204ENST00000472217 GPR50Q13585 617 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 EBI3Q14213 229 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 ACSM3Q53FZ2 586 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 KHDC1LQ5JSQ8 128 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 C6orf141Q5SZD1 244 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 C6orf183Q5T699 404 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 FAM27D1Q5T7N8 215 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 SYT6Q5T7P8 510 aaPredicted RBP7.15□□□□□ -1.26
USF1-204ENST00000472217 RNLSQ5VYX0 342 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 SIGIRRQ6IA17 410 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 SLC25A48Q6ZT89 311 aaKnown RBP7.15□□□□□ -1.26
USF1-204ENST00000472217 MOB3BQ86TA1 216 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 PRR18Q8N4B5 295 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 LINC00311Q8N616 119 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 ZNF439Q8NDP4 499 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 SGCDQ92629 289 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 ST6GALNAC6Q969X2 333 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 FAM46BQ96A09 425 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 PHF21AQ96BD5 680 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 NOL4LQ96MY1 436 aaPredicted RBP7.15□□□□□ -1.26
USF1-204ENST00000472217 UQCC2Q9BRT2 126 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 TMED9Q9BVK6 235 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 GNG12Q9UBI6 72 aa7.15□□□□□ -1.26
USF1-204ENST00000472217 LSM2Q9Y333 95 aaKnown RBP7.15□□□□□ -1.26
USF1-204ENST00000472217 UBE2QL1A1L167 161 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 PSMB11A5LHX3 300 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 PTGES3LE9PB15 166 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 SPINT2O43291 252 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 PDCD6O75340 191 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 CA11O75493 328 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 PF4P02776 101 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 RCC1P18754 421 aaPredicted RBP7.14□□□□□ -1.27
USF1-204ENST00000472217 CD33P20138 364 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 FUT3P21217 361 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 AQP4P55087 323 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 SPHARQ15513 63 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 TMEM30BQ3MIR4 351 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 Q3ZCU0 254 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 RBM48Q5RL73 367 aaKnown RBP7.14□□□□□ -1.27
USF1-204ENST00000472217 TRAT1Q6PIZ9 186 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 UNQ9370/PRO34162Q6UXP9 181 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 ZNF329Q86UD4 541 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 LRRTM1Q86UE6 522 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 IZUMO1Q8IYV9 350 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 MS4A15Q8N5U1 240 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 Q8N6K4 173 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 WFDC9Q8NEX5 89 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 OR10V1Q8NGI7 309 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 OR1L1Q8NH94 360 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 NRG4Q8WWG1 115 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 RTN4IP1Q8WWV3 396 aaPredicted RBP7.14□□□□□ -1.27
USF1-204ENST00000472217 EAF1Q96JC9 268 aaPredicted RBP7.14□□□□□ -1.27
USF1-204ENST00000472217 TGP01266 2768 aa7.14□□□□□ -1.27
USF1-204ENST00000472217 CMYA5Q8N3K9 4069 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 SERPINE3A8MV23 424 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 ZNF736B4DX44 427 aaPredicted RBP7.13□□□□□ -1.27
USF1-204ENST00000472217 H0YHG0 523 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 MPIG6BO95866 241 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 IGHG2P01859 326 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 GLAP06280 429 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 UBBP0CG47 229 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 VSIG8P0DPA2 414 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 IGLL1P15814 213 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 IL3RAP26951 378 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 ZNF134P52741 427 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 ZNF137PP52743 207 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 SLC35A2P78381 396 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 IRF3Q14653 427 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 GNMTQ14749 295 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 MED22Q15528 200 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 CT45A1Q5HYN5 189 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 NKAPLQ5M9Q1 402 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 C1orf100Q5SVJ3 147 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 OR10K2Q6IF99 312 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 Q6ZPA2 131 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 REC114Q7Z4M0 266 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 C5orf24Q7Z6I8 188 aa7.13□□□□□ -1.27
USF1-204ENST00000472217 SLC35E3Q7Z769 313 aa7.13□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms