RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 DYNC1I1O14576 645 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 ACTBP60709 375 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 LSAMPQ13449 338 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 KISS1Q15726 138 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 FAM220AQ7Z4H9 259 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 ARHGAP24Q8N264 748 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 OR10H4Q8NGA5 316 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 OR10AC1Q8NH08 325 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 RITA1Q96K30 269 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 THAP7Q9BT49 309 aaPredicted RBP14.52□□□□□ -0.09
SORT1-203ENST00000471996 DPCDQ9BVM2 203 aaPredicted RBP14.52□□□□□ -0.09
SORT1-203ENST00000471996 ANKRD60Q9BZ19 345 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 FRRS1LQ9P0K9 344 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 WARS2Q9UGM6 360 aaKnown RBP14.52□□□□□ -0.09
SORT1-203ENST00000471996 GNG8Q9UK08 70 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 FOXA2Q9Y261 457 aaPredicted RBP14.52□□□□□ -0.09
SORT1-203ENST00000471996 ERGIC3Q9Y282 383 aa14.52□□□□□ -0.09
SORT1-203ENST00000471996 H0Y980 276 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 IGHV3-11P01762 117 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 CRIP2P52943 208 aaPredicted RBP14.51□□□□□ -0.09
SORT1-203ENST00000471996 RAB40BQ12829 278 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 ECSCRQ19T08 205 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 C5orf64Q2M2E5 130 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 PIGYQ3MUY2 71 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 TP53I3Q53FA7 332 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 RNLSQ5VYX0 342 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 LIN54Q6MZP7 749 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 FAHD1Q6P587 224 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 LINC00322Q6ZN03 302 aaPredicted RBP14.51□□□□□ -0.09
SORT1-203ENST00000471996 GTSCR1Q86UQ5 136 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 SUMF2Q8NBJ7 301 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 ZNF439Q8NDP4 499 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 PXT1Q8NFP0 134 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 OR51A4Q8NGJ6 313 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 LRGUKQ96M69 825 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 IL4I1Q96RQ9 567 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 CST11Q9H112 138 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 CEPT1Q9Y6K0 416 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 TNCP24821 2201 aa14.51□□□□□ -0.09
SORT1-203ENST00000471996 TMEM30CPA0ZSE6 113 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 NBR2O15453 112 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 ORC5O43913 435 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 ZNF134P52741 427 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 NDPQ00604 133 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 ZSCAN26Q16670 478 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 ZNF691Q5VV52 312 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 TCTEX1D1Q8N7M0 179 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 OR13C3Q8NGS6 347 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 NSL1Q96IY1 281 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 ZNF251Q9BRH9 671 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 FBXO7Q9Y3I1 522 aa14.5□□□□□ -0.09
SORT1-203ENST00000471996 LANCL1O43813 399 aa14.49□□□□□ -0.09
SORT1-203ENST00000471996 RGS11O94810 467 aa14.49□□□□□ -0.09
SORT1-203ENST00000471996 FAM107AO95990 144 aa14.49□□□□□ -0.09
SORT1-203ENST00000471996 NANOS3P60323 173 aaKnown RBP14.49□□□□□ -0.09
SORT1-203ENST00000471996 ZNF85Q03923 595 aa14.49□□□□□ -0.09
SORT1-203ENST00000471996 CT45A1Q5HYN5 189 aa14.49□□□□□ -0.09
SORT1-203ENST00000471996 CT45A3Q8NHU0 189 aa14.49□□□□□ -0.09
SORT1-203ENST00000471996 CCDC107Q8WV48 283 aa14.49□□□□□ -0.09
SORT1-203ENST00000471996 CANT1Q8WVQ1 401 aa14.49□□□□□ -0.09
SORT1-203ENST00000471996 RHOVQ96L33 236 aa14.49□□□□□ -0.09
SORT1-203ENST00000471996 NABP2Q9BQ15 211 aa14.49□□□□□ -0.09
SORT1-203ENST00000471996 ZNF581Q9P0T4 197 aa14.49□□□□□ -0.09
SORT1-203ENST00000471996 KIAA1109Q2LD37 5005 aa14.48□□□□□ -0.09
SORT1-203ENST00000471996 DAPP51397 102 aa14.48□□□□□ -0.09
SORT1-203ENST00000471996 C12orf73Q69YU5 71 aa14.48□□□□□ -0.09
SORT1-203ENST00000471996 PYHIN1Q6K0P9 492 aa14.48□□□□□ -0.09
SORT1-203ENST00000471996 FDX2Q6P4F2 183 aa14.48□□□□□ -0.09
SORT1-203ENST00000471996 ASB9Q96DX5 294 aa14.48□□□□□ -0.09
SORT1-203ENST00000471996 IFT22Q9H7X7 185 aa14.48□□□□□ -0.09
SORT1-203ENST00000471996 B2RBV5 119 aa14.47□□□□□ -0.09
SORT1-203ENST00000471996 SULT1B1O43704 296 aa14.47□□□□□ -0.09
SORT1-203ENST00000471996 CSTBP04080 98 aaKnown RBP14.47□□□□□ -0.09
SORT1-203ENST00000471996 CALB2P22676 271 aa14.47□□□□□ -0.09
SORT1-203ENST00000471996 EPHA2P29317 976 aa14.47□□□□□ -0.09
SORT1-203ENST00000471996 ATP6V1E1P36543 226 aa14.47□□□□□ -0.09
SORT1-203ENST00000471996 LRRC36Q1X8D7 754 aa14.47□□□□□ -0.09
SORT1-203ENST00000471996 ZNF660Q6AZW8 331 aaPredicted RBP14.47□□□□□ -0.09
SORT1-203ENST00000471996 IL34Q6ZMJ4 242 aa14.47□□□□□ -0.09
SORT1-203ENST00000471996 CCDC197Q8NCU1 140 aa14.47□□□□□ -0.09
SORT1-203ENST00000471996 NPBQ8NG41 125 aa14.47□□□□□ -0.09
SORT1-203ENST00000471996 GNG12Q9UBI6 72 aa14.47□□□□□ -0.09
SORT1-203ENST00000471996 NUBP2Q9Y5Y2 271 aa14.47□□□□□ -0.09
SORT1-203ENST00000471996 SHISA3A0PJX4 238 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 ZAR1LA6NP61 321 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 BRI3O95415 125 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 ZP3P21754 424 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 CCR9P51686 369 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 TMEM267Q0VDI3 215 aaPredicted RBP14.46□□□□□ -0.09
SORT1-203ENST00000471996 RSU1Q15404 277 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 STEAP3Q658P3 488 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 CD200R1LQ6Q8B3 271 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 OR10V1Q8NGI7 309 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 OR5D14Q8NGL3 314 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 OR10K1Q8NGX5 313 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 NRBF2Q96F24 287 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 MS4A10Q96PG2 267 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 ST6GALNAC5Q9BVH7 336 aa14.46□□□□□ -0.09
SORT1-203ENST00000471996 RANGRFQ9HD47 186 aaPredicted RBP14.46□□□□□ -0.09
SORT1-203ENST00000471996 ST3GAL6Q9Y274 331 aa14.46□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 87.5 ms