RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 CHMP1AQ9HD42 196 aaPredicted RBP12.29□□□□□ -0.44
SNX13-205ENST00000471744 C12orf4Q9NQ89 552 aa12.29□□□□□ -0.44
SNX13-205ENST00000471744 ZNRD1Q9P1U0 126 aa12.29□□□□□ -0.44
SNX13-205ENST00000471744 SPATA2Q9UM82 520 aa12.29□□□□□ -0.44
SNX13-205ENST00000471744 SOX21Q9Y651 276 aaPredicted RBP12.29□□□□□ -0.44
SNX13-205ENST00000471744 TRAV39A0A0B4J263 110 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 MDFIC2A0A1B0GVS7 189 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 BTBD17A6NE02 478 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 DNAJC9-AS1A6NH13 148 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 F2RL2O00254 374 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 MELTFP08582 738 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 HTR1DP28221 377 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 TGFBR1P36897 503 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 GDNFP39905 211 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 UBA52P62987 128 aaKnown RBP12.28□□□□□ -0.44
SNX13-205ENST00000471744 PLA2G7Q13093 441 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 CTF1Q16619 201 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 PLAC9Q5JTB6 97 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 CMSS1Q9BQ75 279 aaKnown RBP12.28□□□□□ -0.44
SNX13-205ENST00000471744 MEGF9Q9H1U4 602 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 ESM1Q9NQ30 184 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 RHBDL2Q9NX52 303 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 AK3Q9UIJ7 227 aa12.28□□□□□ -0.44
SNX13-205ENST00000471744 AMMECR1Q9Y4X0 333 aaPredicted RBP12.28□□□□□ -0.44
SNX13-205ENST00000471744 A0A0A6YYH2 397 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 A6NJ64 397 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 C12orf77C9JDV5 145 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 SDCBPO00560 298 aaPredicted RBP12.27□□□□□ -0.45
SNX13-205ENST00000471744 HBZP02008 142 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 CD3GP09693 182 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 HIST1H1DP16402 221 aaKnown RBP12.27□□□□□ -0.45
SNX13-205ENST00000471744 RCC1P18754 421 aaPredicted RBP12.27□□□□□ -0.45
SNX13-205ENST00000471744 CEACAM3P40198 252 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 SLC9A3R2Q15599 337 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 HLA-DRB5Q30154 266 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 ZNF880Q6PDB4 577 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 OR5R1Q8NH85 324 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 NDNFQ8TB73 568 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 FAM216AQ8WUB2 273 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 RAB2BQ8WUD1 216 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 TAF9BQ9HBM6 251 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 ZNF286AQ9HBT8 521 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP12.27□□□□□ -0.452e-7■■■■■ 54.7
SNX13-205ENST00000471744 GFOD1Q9NXC2 390 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 DPM3Q9P2X0 92 aa12.27□□□□□ -0.45
SNX13-205ENST00000471744 LEUTXA8MZ59 168 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 MFNGO00587 321 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 HOXA3O43365 443 aaPredicted RBP12.26□□□□□ -0.45
SNX13-205ENST00000471744 NOL3O60936 208 aaKnown RBP12.26□□□□□ -0.45
SNX13-205ENST00000471744 IGLV1-47P01700 117 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 RNASE1P07998 156 aaKnown RBP12.26□□□□□ -0.45
SNX13-205ENST00000471744 IER3P46695 156 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 ARHGDIBP52566 201 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 TMBIM6P55061 237 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 HTD2P86397 168 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 HMGN3Q15651 99 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 LTC4SQ16873 150 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 MOGAT2Q3SYC2 334 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 C8orf31Q8N9H6 132 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 OR4P4Q8NGL7 312 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 GALMQ96C23 342 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 AJUBAQ96IF1 538 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 NAA50Q9GZZ1 169 aaKnown RBP12.26□□□□□ -0.45
SNX13-205ENST00000471744 MMP28Q9H239 520 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 GNG12Q9UBI6 72 aa12.26□□□□□ -0.45
SNX13-205ENST00000471744 FAM172BPA6NC97 362 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 VGLL3A8MV65 326 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 OOSP1A8MZH6 123 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 J3QR06 171 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 RGS11O94810 467 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 GSTP1P09211 210 aaKnown RBP12.25□□□□□ -0.45
SNX13-205ENST00000471744 RORCP51449 518 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 LOXL3P58215 753 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 RPL15P61313 204 aaKnown RBP12.25□□□□□ -0.45
SNX13-205ENST00000471744 PITPNAQ00169 270 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 LRRC75BQ2VPJ9 315 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 STEAP3Q658P3 488 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 BAIAP2L2Q6UXY1 529 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 LHFPL4Q7Z7J7 247 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 CLVS1Q8IUQ0 354 aaPredicted RBP12.25□□□□□ -0.45
SNX13-205ENST00000471744 PRR18Q8N4B5 295 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 OR5H6Q8NGV6 325 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 OR1L1Q8NH94 360 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 SETD6Q8TBK2 473 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 ACOT12Q8WYK0 555 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 AP3S1Q92572 193 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 DCSTAMPQ9H295 470 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 DIABLOQ9NR28 239 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 JPT1Q9UK76 154 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 PSG11Q9UQ72 335 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 KCNK7Q9Y2U2 307 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 COL6A5A8TX70 2615 aa12.25□□□□□ -0.45
SNX13-205ENST00000471744 A0A075B6Q4 140 aa12.24□□□□□ -0.45
SNX13-205ENST00000471744 RNF212BA8MTL3 300 aa12.24□□□□□ -0.45
SNX13-205ENST00000471744 BUB1B-PAK6H3BSN5 160 aa12.24□□□□□ -0.45
SNX13-205ENST00000471744 GNB3P16520 340 aa12.24□□□□□ -0.45
SNX13-205ENST00000471744 TALDO1P37837 337 aa12.24□□□□□ -0.45
SNX13-205ENST00000471744 DYNLT3P51808 116 aa12.24□□□□□ -0.45
SNX13-205ENST00000471744 ARFRP1Q13795 201 aa12.24□□□□□ -0.45
SNX13-205ENST00000471744 SSX2Q16385 188 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 64.3 ms