RNA–Protein interactions for RNA: ENST00000471701.1

PRPF40A-207, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 293 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-207ENST00000471701 SLC2A1P11166 492 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 GALP22466 123 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 RAB2AP61019 212 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 HIKESHIQ53FT3 197 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 ASCL4Q6XD76 172 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 GLT6D1Q7Z4J2 308 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 FAM19A1Q7Z5A9 133 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 OR11H1Q8NG94 326 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 OR10A6Q8NH74 314 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 NELFBQ8WX92 580 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 NAP1L5Q96NT1 182 aaPredicted RBP0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 BIRC8Q96P09 236 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 APOL4Q9BPW4 351 aa0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 UTP23Q9BRU9 249 aaKnown RBP0.17□□□□□ -2.38
PRPF40A-207ENST00000471701 MYO5BQ9ULV0 1848 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 USP24Q9UPU5 2620 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 IGHV3-73A0A0B4J1V6 119 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 ZNF705FA8MVS1 300 aaPredicted RBP0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 K7EQS6 105 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 FGF16O43320 207 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 GNRH2O43555 120 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 ENSAO43768 121 aaKnown RBP0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 CTSEP14091 401 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 INPP1P49441 399 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 MP68P56378 58 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 CLDN8P56748 225 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 SLC38A11Q08AI6 406 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 PDGFRLQ15198 375 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 GUSBP1Q15486 140 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 LRRC28Q86X40 367 aaPredicted RBP0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 GID4Q8IVV7 300 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 SLC35G5Q96KT7 338 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 SUCNR1Q9BXA5 334 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 TM6SF2Q9BZW4 377 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 IQCGQ9H095 443 aaKnown RBP0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 FBXL15Q9H469 300 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 RRP15Q9Y3B9 282 aaKnown RBP0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 C22orf24Q9Y442 160 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 MYO15BQ96JP2 1530 aa0.16□□□□□ -2.38
PRPF40A-207ENST00000471701 ZNF532Q9HCE3 1301 aa0.15□□□□□ -2.38
PRPF40A-207ENST00000471701 FAM183AA6NL82 134 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 RFPL4AA6NLU0 287 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 RFPL4AL1F8VTS6 287 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 GMDSO60547 372 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 CBX5P45973 191 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 DAOAP59103 153 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 HBG1P69891 147 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 HBG2P69892 147 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 ZNF90Q03938 601 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 LRRC74AQ0VAA2 488 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 MRPL51Q4U2R6 128 aaKnown RBP0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 PIP5KL1Q5T9C9 394 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 FGF13Q92913 245 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 ZNF514Q96K75 400 aaPredicted RBP0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 Q96M85 177 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 TBX5Q99593 518 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 SDHAF2Q9NX18 166 aa0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 KLK5Q9Y337 293 aaPredicted RBP0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 PUS1Q9Y606 427 aaKnown RBP eCLIP0.15□□□□□ -2.39
PRPF40A-207ENST00000471701 WDR90Q96KV7 1748 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 TMSB15BA0A087X1C1 80 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 IGHV3-30-3P0DP02 117 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 SPNP16150 400 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 CPN2P22792 545 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 PYCR1P32322 319 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 HSPA13P48723 471 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 RAB38P57729 211 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 ERHP84090 104 aaKnown RBP0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 STX4Q12846 297 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 PSG3Q16557 428 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 EBLN2Q6P2I7 272 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 RASL11AQ6T310 242 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 OR9I1Q8NGQ6 314 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 ASB17Q8WXJ9 295 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 GTF2H4Q92759 462 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 EBPLQ9BY08 206 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 STK38LQ9Y2H1 464 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 V9GYY9 64 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 NUMA1Q14980 2115 aa0.14□□□□□ -2.39
PRPF40A-207ENST00000471701 DNMT1P26358 1616 aaKnown RBP0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 C8orf87E5RJ46 101 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 H3BPC8 53 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 C1QCP02747 245 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 ESDP10768 282 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 SLC25A16P16260 332 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 GPX2P18283 190 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 TSPOP30536 169 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 ARR3P36575 388 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 TTPAP49638 278 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 BCAP31P51572 246 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 HOXC5Q00444 222 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 PRDX1Q06830 199 aaKnown RBP0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 NNATQ16517 81 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 RESP18Q5W5W9 173 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 ARHGAP18Q8N392 663 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 OR51L1Q8NGJ5 315 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 DOK4Q8TEW6 326 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 ODF3Q96PU9 254 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 MGLLQ99685 303 aa0.13□□□□□ -2.39
PRPF40A-207ENST00000471701 PITX2Q99697 317 aa0.13□□□□□ -2.39
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms