RNA–Protein interactions for RNA: ENST00000471658.5

PSPC1-203, Transcript of paraspeckle component 1, humanhuman

TSL 1 (best)

Gene PSPC1, Length 1,647 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSPC1-203ENST00000471658 ONECUT1Q9UBC0 465 aa15.78■□□□□ 0.12
PSPC1-203ENST00000471658 IGHV3-43A0A0B4J1X8 118 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 IGHV2-70DA0A0C4DH43 119 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 ZNF729A6NN14 1252 aaPredicted RBP15.77■□□□□ 0.12
PSPC1-203ENST00000471658 ZNF736B4DX44 427 aaPredicted RBP15.77■□□□□ 0.12
PSPC1-203ENST00000471658 NPIPB11E5RHQ5 1161 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 SMAD7O15105 426 aaKnown RBP15.77■□□□□ 0.12
PSPC1-203ENST00000471658 LIPFP07098 398 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 CSF1P09603 554 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 IGHV3-43DP0DP04 118 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 INPP1P49441 399 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 ARPC4P59998 168 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 PRB3Q04118 309 aaPredicted RBP15.77■□□□□ 0.12
PSPC1-203ENST00000471658 STEAP1BQ6NZ63 245 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 OR52L2PQ8NGH6 319 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 OR4A4PQ8NGN8 299 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 OR1A1Q9P1Q5 309 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 MGAT4AQ9UM21 535 aa15.77■□□□□ 0.12
PSPC1-203ENST00000471658 POLR3KQ9Y2Y1 108 aaPredicted RBP15.77■□□□□ 0.12
PSPC1-203ENST00000471658 CR1P17927 2039 aa15.77■□□□□ 0.11
PSPC1-203ENST00000471658 BET1O15155 118 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 PLA2G10O15496 165 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 TAS2R19P59542 299 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 GNMTQ14749 295 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 TMEM249Q2WGJ8 235 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 C11orf91Q3C1V1 193 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 TRAT1Q6PIZ9 186 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 Q8N7P7 452 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 OPN4Q9UHM6 478 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 SPINT2O43291 252 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 ENSAO43768 121 aaKnown RBP15.76■□□□□ 0.11
PSPC1-203ENST00000471658 CD74P04233 296 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 MSMBP08118 114 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 IGHV4-31P0DP07 118 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 OR3A3P47888 321 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 CDK10Q15131 360 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 C16orf87Q6PH81 154 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 OR10V1Q8NGI7 309 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 OR5H2Q8NGV7 314 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 LEAP2Q969E1 77 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 GALMQ96C23 342 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 MSI2Q96DH6 328 aaKnown RBP15.76■□□□□ 0.11
PSPC1-203ENST00000471658 TMPRSS13Q9BYE2 586 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 GAL3ST2Q9H3Q3 398 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 LINC00574Q9H8X3 128 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 HRASLSQ9HDD0 168 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 TAS2R8Q9NYW2 309 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 IDI2-AS1Q9NZ38 188 aa15.76■□□□□ 0.11
PSPC1-203ENST00000471658 YLPM1P49750 1951 aaKnown RBP15.75■□□□□ 0.11
PSPC1-203ENST00000471658 ITPR3Q14573 2671 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 FAM172BPA6NC97 362 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 C17orf98A8MV24 154 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 B4DSR2 109 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 F2RL2O00254 374 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 RAB3DO95716 219 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 IGHV3-7P01780 117 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 NFYBP25208 207 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 ZNF782Q6ZMW2 699 aaPredicted RBP15.75■□□□□ 0.11
PSPC1-203ENST00000471658 OVCH2Q7RTZ1 564 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 ZNF554Q86TJ5 538 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 LINC01356Q8N9X3 169 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 OR4C16Q8NGL9 310 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 OR56B4Q8NH76 319 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 CABLES2Q9BTV7 478 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 PARP12Q9H0J9 701 aaKnown RBP15.75■□□□□ 0.11
PSPC1-203ENST00000471658 EHFQ9NZC4 300 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 SLC23A1Q9UHI7 598 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 ZNF107Q9UII5 783 aaPredicted RBP15.75■□□□□ 0.11
PSPC1-203ENST00000471658 TBC1D24Q9ULP9 559 aa15.75■□□□□ 0.11
PSPC1-203ENST00000471658 ZNF469Q96JG9 3925 aaPredicted RBP15.75■□□□□ 0.11
PSPC1-203ENST00000471658 ZNF735P0CB33 412 aa15.74■□□□□ 0.11
PSPC1-203ENST00000471658 AKAIN1P0CW23 69 aa15.74■□□□□ 0.11
PSPC1-203ENST00000471658 OR5H8P0DN80 308 aa15.74■□□□□ 0.11
PSPC1-203ENST00000471658 DVL1P1P54792 670 aaPredicted RBP15.74■□□□□ 0.11
PSPC1-203ENST00000471658 LOXL3P58215 753 aa15.74■□□□□ 0.11
PSPC1-203ENST00000471658 TAS2R46P59540 309 aa15.74■□□□□ 0.11
PSPC1-203ENST00000471658 RNASE10Q5GAN6 216 aaKnown RBP15.74■□□□□ 0.11
PSPC1-203ENST00000471658 HEPN1Q6WQI6 88 aa15.74■□□□□ 0.11
PSPC1-203ENST00000471658 SLC6A7Q99884 636 aa15.74■□□□□ 0.11
PSPC1-203ENST00000471658 NECAP2Q9NVZ3 263 aa15.74■□□□□ 0.11
PSPC1-203ENST00000471658 INSIG2Q9Y5U4 225 aa15.74■□□□□ 0.11
PSPC1-203ENST00000471658 MYO9AB2RTY4 2548 aa15.73■□□□□ 0.11
PSPC1-203ENST00000471658 TRBV6-7A0A0A0MS04 114 aa15.73■□□□□ 0.11
PSPC1-203ENST00000471658 NFYAP23511 347 aaPredicted RBP15.73■□□□□ 0.11
PSPC1-203ENST00000471658 FPR2P25090 351 aa15.73■□□□□ 0.11
PSPC1-203ENST00000471658 PPP1CCP36873 323 aaKnown RBP15.73■□□□□ 0.11
PSPC1-203ENST00000471658 OR2S2Q9NQN1 319 aa15.73■□□□□ 0.11
PSPC1-203ENST00000471658 SETXQ7Z333 2677 aaKnown RBP15.73■□□□□ 0.11
PSPC1-203ENST00000471658 A0A1W2PPH5 198 aa15.72■□□□□ 0.11
PSPC1-203ENST00000471658 TGFAP01135 160 aa15.72■□□□□ 0.11
PSPC1-203ENST00000471658 IGHV1-8P0DP01 117 aa15.72■□□□□ 0.11
PSPC1-203ENST00000471658 CEACAM6P40199 344 aa15.72■□□□□ 0.11
PSPC1-203ENST00000471658 AP3S2P59780 193 aa15.72■□□□□ 0.11
PSPC1-203ENST00000471658 DYRK1AQ13627 763 aa15.72■□□□□ 0.11
PSPC1-203ENST00000471658 COX4I2Q96KJ9 171 aa15.72■□□□□ 0.11
PSPC1-203ENST00000471658 SUCNR1Q9BXA5 334 aa15.72■□□□□ 0.11
PSPC1-203ENST00000471658 SIRT7Q9NRC8 400 aa15.72■□□□□ 0.11
PSPC1-203ENST00000471658 HIF1ANQ9NWT6 349 aa15.72■□□□□ 0.11
PSPC1-203ENST00000471658 HSPA12AO43301 675 aa15.72■□□□□ 0.11
PSPC1-203ENST00000471658 AMY2AP04746 511 aa15.72■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms