RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 KCNE4Q8WWG9 221 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 ST6GALNAC6Q969X2 333 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 GPR146Q96CH1 333 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 ZC2HC1AQ96GY0 325 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 YPEL2Q96QA6 119 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 SLC25A22Q9H936 323 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 THAP10Q9P2Z0 257 aaPredicted RBP3.65□□□□□ -1.82
VPS50-210ENST00000471188 ANXA10Q9UJ72 324 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 MCTS1Q9ULC4 181 aaKnown RBP3.65□□□□□ -1.82
VPS50-210ENST00000471188 SEC16AO15027 2179 aa3.65□□□□□ -1.82
VPS50-210ENST00000471188 KIAA1549Q9HCM3 1950 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 MDFIC2A0A1B0GVS7 189 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 OR6C6A6NF89 314 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 SERPINE3A8MV23 424 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 NPIPB7O75200 414 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 ZNF253O75346 499 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 GPR75O95800 540 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 ZNF10P21506 573 aaPredicted RBP3.65□□□□□ -1.83
VPS50-210ENST00000471188 KITLGP21583 273 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 MDH2P40926 338 aaKnown RBP3.65□□□□□ -1.83
VPS50-210ENST00000471188 SCGB2A2Q13296 93 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 CPEB4Q17RY0 729 aaKnown RBP eCLIP3.65□□□□□ -1.83
VPS50-210ENST00000471188 ZNF658BQ4V348 819 aaPredicted RBP3.65□□□□□ -1.83
VPS50-210ENST00000471188 NRSN1Q8IZ57 195 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 CCDC71LQ8N9Z2 235 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 LRRC75AQ8NAA5 344 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 SLC38A9Q8NBW4 561 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 OR2M3Q8NG83 312 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 OR1N2Q8NGR9 330 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 RLN3Q8WXF3 142 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 NAT6Q93015 286 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 TMEM186Q96B77 213 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 C8orf44Q96CB5 159 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 TMEM56Q96MV1 263 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 PBOV1Q9GZY1 135 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 MRPL18Q9H0U6 180 aaKnown RBP3.65□□□□□ -1.83
VPS50-210ENST00000471188 FAM60AQ9NP50 221 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 NRN1Q9NPD7 142 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 NECAP2Q9NVZ3 263 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 ERRFI1Q9UJM3 462 aaPredicted RBP3.65□□□□□ -1.83
VPS50-210ENST00000471188 TMEM56-RWDD3S4R434 201 aa3.65□□□□□ -1.83
VPS50-210ENST00000471188 PCNX3Q9H6A9 2034 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 IGHV1-69-2A0A0G2JMI3 117 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 PGPEP1LA6NFU8 196 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 GJE1A6NN92 205 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 CYR61O00622 381 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 NKX2-2O95096 273 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 EOMESO95936 686 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 MT-CO2P00403 227 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 NRASP01111 189 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 KRASP01116 189 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 CRYAAP02489 173 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 TYMSP04818 313 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 ISG15P05161 165 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 CTXN2P0C2S0 81 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 ASAH2BP0C7U1 165 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 ERGP11308 486 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 MSR1P21757 451 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 IER3P46695 156 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 RPL27P61353 136 aaKnown RBP3.64□□□□□ -1.83
VPS50-210ENST00000471188 PMP22Q01453 160 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 PRICKLE4Q2TBC4 344 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 KIAA1644Q3SXP7 199 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 MPV17L2Q567V2 206 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 STUMQ69YW2 141 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 LCN12Q6JVE5 192 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 PRSS41Q7RTY9 318 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 RD3Q7Z3Z2 195 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 C20orf196Q8IYI0 205 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 FAM19A2Q8N3H0 131 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 TMEM52Q8NDY8 209 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 OR2Y1Q8NGV0 311 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 OR10G6Q8NH81 332 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 PLPPR1Q8TBJ4 325 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 GATAD1Q8WUU5 269 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 LMLNQ96KR4 655 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 LINC00615Q96LM1 132 aaPredicted RBP3.64□□□□□ -1.83
VPS50-210ENST00000471188 AP1S3Q96PC3 154 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 RNF114Q9Y508 228 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 LTBP2Q14767 1821 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 UNC13CQ8NB66 2214 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 A0A1B0GV72 72 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 SNURFLB1AK76 121 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 G3V3Y1 287 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 HRKO00198 91 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 PAGE4O60829 102 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 DUSP11O75319 330 aaKnown RBP3.64□□□□□ -1.83
VPS50-210ENST00000471188 NUDT3O95989 172 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 C1QTNF9P0C862 333 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 IAPPP10997 89 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 FAHP16930 419 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 PLA2G5P39877 138 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 THBS3P49746 956 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 ZNF133P52736 654 aaPredicted RBP3.64□□□□□ -1.83
VPS50-210ENST00000471188 CLDN18P56856 261 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 RPL15P61313 204 aaKnown RBP3.64□□□□□ -1.83
VPS50-210ENST00000471188 FKBP1BP68106 108 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 EGR4Q05215 589 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 BAXQ07812 192 aa3.64□□□□□ -1.83
VPS50-210ENST00000471188 SMAGPQ0VAQ4 97 aa3.64□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms