RNA–Protein interactions for RNA: ENST00000470837.1

CCM2-204, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 549 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-204ENST00000470837 H2AFB2P0C5Z0 115 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 SLC25A16P16260 332 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 NFYAP23511 347 aaPredicted RBP8.09□□□□□ -1.11
CCM2-204ENST00000470837 FPR2P25090 351 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 SSTR5P35346 364 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 CEACAM6P40199 344 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 FXYD4P59646 89 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 HTD2P86397 168 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 SURF2Q15527 256 aaPredicted RBP8.09□□□□□ -1.11
CCM2-204ENST00000470837 LTC4SQ16873 150 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 ABCA11PQ4W5N1 156 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 PLA1AQ53H76 456 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 WDR25Q64LD2 544 aaPredicted RBP8.09□□□□□ -1.11
CCM2-204ENST00000470837 DHRS11Q6UWP2 260 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 BTN2A1Q7KYR7 527 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 OR1L1Q8NH94 360 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 RFESDQ8TAC1 157 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 ZFAND1Q8TCF1 268 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 C10orf105Q8TEF2 133 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 EDARADDQ8WWZ3 215 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 CORO2AQ92828 525 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 TOMM40LQ969M1 308 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 CABLES2Q9BTV7 478 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 C20orf85Q9H1P6 137 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 MMP28Q9H239 520 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 OCEL1Q9H607 264 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 C19orf12Q9NSK7 152 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 ARFGEF3Q5TH69 2177 aa8.09□□□□□ -1.11
CCM2-204ENST00000470837 TRAV6A0A075B6T7 132 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 TRBV6-7A0A0A0MS04 114 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 PPIAL4CA0A0B4J2A2 164 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 MEX3AA1L020 520 aaKnown RBP8.08□□□□□ -1.12
CCM2-204ENST00000470837 NPIPB11E5RHQ5 1161 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 ARPC1BO15143 372 aaKnown RBP8.08□□□□□ -1.12
CCM2-204ENST00000470837 FOXH1O75593 365 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 IGHV2-5P01817 119 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 LIPFP07098 398 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 ZNF735P0CB33 412 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 ZNF728P0DKX0 622 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 PPIAL4GP0DN37 164 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 NFYBP25208 207 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 BTCP35070 178 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 LUMP51884 338 aaPredicted RBP8.08□□□□□ -1.12
CCM2-204ENST00000470837 RAB25P57735 213 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 TAS2R31P59538 309 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 KRTAP10-9P60411 292 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 CR1LQ2VPA4 569 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 TMEM200BQ69YZ2 307 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 HIST2H2BCQ6DN03 193 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 TMED4Q7Z7H5 227 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 SLC38A6Q8IZM9 456 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 ZDHHC22Q8N966 263 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 OR10A7Q8NGE5 316 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 UBALD1Q8TB05 177 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 MBD6Q96DN6 1003 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 DCTN5Q9BTE1 182 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 TMPRSS13Q9BYE2 586 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 GPN1Q9HCN4 374 aaPredicted RBP8.08□□□□□ -1.12
CCM2-204ENST00000470837 IDI2-AS1Q9NZ38 188 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 RPUSD1Q9UJJ7 312 aaKnown RBP8.08□□□□□ -1.12
CCM2-204ENST00000470837 JPT1Q9UK76 154 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 OR2W1Q9Y3N9 320 aa8.08□□□□□ -1.12
CCM2-204ENST00000470837 HELZ2Q9BYK8 2649 aaKnown RBP8.08□□□□□ -1.12
CCM2-204ENST00000470837 F5H0A9 414 aaPredicted RBP8.07□□□□□ -1.12
CCM2-204ENST00000470837 C15orf65H3BRN8 121 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 PHF1O43189 567 aaPredicted RBP8.07□□□□□ -1.12
CCM2-204ENST00000470837 ENSAO43768 121 aaKnown RBP8.07□□□□□ -1.12
CCM2-204ENST00000470837 PRAF2O60831 178 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 PEX14O75381 377 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 SLC22A5O76082 557 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 PPYP01298 95 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 SPNP16150 400 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 AADACP22760 399 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 RAB7AP51149 207 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 RAG2P55895 527 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 HERPUD1Q15011 391 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 C4orf46Q504U0 113 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 BTNL3Q6UXE8 466 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 ZNF841Q6ZN19 808 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 Q6ZPA2 131 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 GLCCI1Q86VQ1 547 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 CMTM1Q8IZ96 169 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 CCDC71LQ8N9Z2 235 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 OR2AK2Q8NG84 335 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 OR52L2PQ8NGH6 319 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 OR10V1Q8NGI7 309 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 CLDND2Q8NHS1 167 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 MARCH1Q8TCQ1 289 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 FAM216AQ8WUB2 273 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 SECTM1Q8WVN6 248 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 MOB3AQ96BX8 217 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 SLC5A7Q9GZV3 580 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 RDH8Q9NYR8 311 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 OR1A1Q9P1Q5 309 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 ONECUT1Q9UBC0 465 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 KCNS2Q9ULS6 477 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 DSCAMO60469 2012 aa8.07□□□□□ -1.12
CCM2-204ENST00000470837 TENM4Q6N022 2769 aa8.06□□□□□ -1.12
CCM2-204ENST00000470837 USF3Q68DE3 2245 aa8.06□□□□□ -1.12
CCM2-204ENST00000470837 RAI1Q7Z5J4 1906 aaPredicted RBP8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms